Gene Overview 
General information
- Gene id
- AL5G16500
- Species
- Arabidopsis lyrata
- Transcript
- AL5G16500.1
- Coordinates
- 13417675 - 13422192
- Strand
- negative
- Chromosome
- scaffold_5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000509 193 genes in 25 species
- Sub family
- ORTHO003098 30 genes in 21 species
- Duplication type
- Tandem duplicate
- Comment
- namefgenesh2_kg.5__1127__AT3G47730.1Protein id485135Transcript id485135Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0010583 response to cyclopentenone C_Hunter 1 6 6 0.000000000410115 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003439 ABC transporter-like IPR003593 ATPase, AAA+ type, core