Gene Overview 
General information
- Gene id
- AL5G12000
- Species
- Arabidopsis lyrata
- Transcript
- AL5G12000.1
- Coordinates
- 10806918 - 10807760
- Strand
- negative
- Chromosome
- scaffold_5
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000310 273 genes in 25 species
- Sub family
- ORTHO011394 17 genes in 12 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- namefgenesh2_kg.5__834__AT3G44260.1Protein id484842Transcript id484842Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0004540 ribonuclease activity C_Hunter 1 3 4 0.000440184 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR006941 Ribonuclease CAF1 IPR012337 Polynucleotidyl transferase, ribonuclease H fold