Gene Overview 
General information
- Gene id
- AL4G05250
- Species
- Arabidopsis lyrata
- Transcript
- AL4G05250.1
- Coordinates
- 3234466 - 3237548
- Strand
- negative
- Chromosome
- scaffold_4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000116 578 genes in 21 species
- Sub family
- ORTHO000077 134 genes in 18 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- nameAl_scaffold_0004_503Protein id868340Transcript id899853Protein informationCannot create amino acid sequence
- Gene structure
-
Loading...please wait
previous gene
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
Loading....please wait
- Functional clusters
-
GO term Description Type Experiment Cluster size Number of genes E-value GO:0005234 extracellular-glutamate-gated ion channel activity C_Hunter 1 5 8 0.000000000283278 - InterPro domain(s)
-
View InterPro domain(s) mappingInterpro id Description IPR015683 Glutamate receptor-related IPR001828 Extracellular ligand-binding receptor IPR001320 Ionotropic glutamate receptor IPR001638 Extracellular solute-binding protein, family 3 IPR017103 Ionotropic glutamate-like receptor, plant