Gene Overview 
General information
- Gene id
- AL4G04220
- Species
- Arabidopsis lyrata
- Transcript
- AL4G04220.1
- Coordinates
- 2581969 - 2585513
- Strand
- positive
- Chromosome
- scaffold_4
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000066 915 genes in 20 species
- Sub family
- ORTHO002190 33 genes in 12 species
- Duplication type
- Tandem duplicate
- Comment
- namescaffold_400428.1Protein id900927Transcript id932440Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0016829 lyase activity C_Hunter 1 4 5 0.000206181 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR008949 Terpenoid synthase IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid IPR005630 Terpene synthase, metal-binding domain IPR001906 Terpene synthase-like