Gene Overview 
General information
- Gene id
- AL3G19510
- Species
- Arabidopsis lyrata
- Transcript
- AL3G19510.1
- Coordinates
- 7718186 - 7721272
- Strand
- positive
- Chromosome
- scaffold_3
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM003658 36 genes in 19 species
- Comment
- namescaffold_302129.1Protein id898159Transcript id929672Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
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- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0031461 cullin-RING ubiquitin ligase complex C_Hunter 1 10 74 0.000289383 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR011046 WD40 repeat-like-containing domain IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain