Gene Overview 
General information
- Gene id
- AL2G21900
- Species
- Arabidopsis lyrata
- Transcript
- AL2G21900.1
- Coordinates
- 15689513 - 15693056
- Strand
- positive
- Chromosome
- scaffold_2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000002 5123 genes in 25 species
- Sub family
- ORTHO001221 40 genes in 17 species
- Duplication type
- Tandem duplicate and Block duplicate
- Comment
- nameAl_scaffold_0002_2000Protein id877406Transcript id908919Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0045087 innate immune response C_Hunter 3 10 27 0.00000000155514 GO:0006952 defense response C_Hunter 3 27 264 0.000245671 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR003591 Leucine-rich repeat, typical subtype IPR002290 Serine/threonine-protein kinase domain IPR020635 Tyrosine-protein kinase, catalytic domain IPR000719 Protein kinase, catalytic domain IPR017442 Serine/threonine-protein kinase-like domain IPR001611 Leucine-rich repeat IPR013210 Leucine-rich repeat-containing N-terminal domain, type 2 IPR011009 Protein kinase-like domain