Gene Overview 
General information
- Gene id
- AL2G17850
- Species
- Arabidopsis lyrata
- Transcript
- AL2G17850.1
- Coordinates
- 13871257 - 13871979
- Strand
- positive
- Chromosome
- scaffold_2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000216 355 genes in 20 species
- Sub family
- ORTHO011852 16 genes in 11 species
- Duplication type
- Block duplicate
- Comment
- namescaffold_201819.1Protein id894745Transcript id926258Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0019222 regulation of metabolic process C_Hunter 3 47 256 0.000189488 GO:0019222 regulation of metabolic process C_Hunter 4 43 243 0.00000440042 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain IPR006455 Homeobox domain, ZF-HD class IPR012287 Homeodomain-related