Gene Overview 
General information
- Gene id
- AL2G10470
- Species
- Arabidopsis lyrata
- Transcript
- AL2G10470.1
- Coordinates
- 8942043 - 8942720
- Strand
- positive
- Chromosome
- scaffold_2
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000211 360 genes in 25 species
- Sub family
- ORTHO005609 25 genes in 19 species
- Duplication type
- Tandem duplicate
- Comment
- namescaffold_201069.1Protein id893995Transcript id925508Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
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- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
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- Functional clusters
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GO term Description Type Experiment Cluster size Number of genes E-value GO:0055114 oxidation reduction C_Hunter 1 29 79 7.23412e-16 GO:0032991 macromolecular complex C_Hunter 3 66 120 1.70484e-43 - InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit IPR006138 NADH:ubiquinone oxidoreductase, 20kDa subunit IPR014406 [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB