Gene Overview 
General information
- Gene id
- AL1G27620
- Species
- Arabidopsis lyrata
- Transcript
- AL1G27620.1
- Coordinates
- 11533764 - 11535029
- Strand
- negative
- Chromosome
- scaffold_1
- Type
- Coding gene
- Sequence
- Show sequence(s)
- Gene family
- HOM000080 839 genes in 25 species
- Sub family
- ORTHO006261 24 genes in 18 species
- Duplication type
- Block duplicate
- Comment
- nameAl_scaffold_0001_2706Protein id880939Transcript id912452Protein informationCannot create amino acid sequence
- Gene structure
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Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologous genes using the Integrative Orthology Viewer.
View
- ....the multiple sequence alignment of the homologous gene family.
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBI's protein database.
- ...the gene in the 'Genomeview' or in the 'AnnoJ' genome browser.
- ...all colinear gene pairs.
Functional annotation information
- GO term(s)
-
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- InterPro domain(s)
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View InterPro domain(s) mappingInterpro id Description IPR009057 Homeodomain-like IPR012287 Homeodomain-related IPR006447 Myb-like DNA-binding domain, SHAQKYF class IPR017930 HTH transcriptional regulator, Myb-type, DNA-binding IPR014778 Myb, DNA-binding