Index of genes with 1 constraints:

Page 8 of 12, showing 20 records out of 235 total, starting on record 141, ending on 160

gene_id species description comment strand chr type
SM00020G01870 smo proteinId=98006;transcriptId=98006;name=e_gw1.20.567.1;transcript=eq;prot=eq - scaffold_20 coding
SM00019G00070 smo proteinId=172620;transcriptId=172620;name=estExt_Genewise1Plus.C_190016;transcript=eq;prot=eq + scaffold_19 coding
VC00008G01930 vca name=e_gw1.8.182.1;pid=57881;prot=eq;tid=57881 + scaffold_8 coding
VC00048G00500 vca name=estExt_Genewise1Plus.C_480037;pid=83034;prot=eq;tid=83034 - scaffold_48 coding
VC00005G02030 vca name=estExt_fgenesh4_pm.C_50016;pid=108919;prot=eq;tid=108919 + scaffold_5 coding
VV10G04410 vvi name=GSVIVG01021502001; transcript=eq;prot=eq;name=GSVIVG01021502001;pid=GSVIVG01021502001;tid=GSVIVT01021502001; + chr10 coding
VV05G02950 vvi name=GSVIVG01017738001; transcript=eq;prot=eq;name=GSVIVG01017738001;pid=GSVIVG01017738001;tid=GSVIVT01017738001; - chr5 coding
VV05G02970 vvi name=GSVIVG01017740001; transcript=eq;prot=eq;name=GSVIVG01017740001;pid=GSVIVG01017740001;tid=GSVIVT01017740001; - chr5 coding
VV07G03630 vvi name=GSVIVG01010966001; transcript=eq;prot=eq;name=GSVIVG01010966001;pid=GSVIVG01010966001;tid=GSVIVT01010966001; + chr7 coding
VV01G12250 vvi name=GSVIVG01020008001; transcript=eq;prot=eq;name=GSVIVG01020008001;pid=GSVIVG01020008001;tid=GSVIVT01020008001; + chr1 coding
VV14G01960 vvi name=GSVIVG01011387001; transcript=eq;prot=eq;name=GSVIVG01011387001;pid=GSVIVG01011387001;tid=GSVIVT01011387001; + chr14 coding
AT1G02980 ath encodes an Arabidopsis cullin;cullin 2 transcript=eq;prot=eq; + 1 coding
AT1G26830 ath Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.;cullin 3 transcript=eq;prot=eq; + 1 coding
AT1G43140 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system, cullin-RING ubiquitin ligase complex; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1); Has 2163 Blast hits to 2131 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 457; Plants - 383; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; + 1 coding
AT1G59790 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 1 (TAIR:AT4G02570.4); Has 1509 Blast hits to 1507 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 762; Fungi - 308; Plants - 286; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; + 1 coding
AT1G59800 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G59790.1); Has 1434 Blast hits to 1434 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 306; Plants - 271; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; + 1 coding
AT1G69670 ath cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.;cullin 3B transcript=eq;prot=eq; - 1 coding
AT3G46910 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 524 Blast hits to 524 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 63; Plants - 121; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; + 3 coding
AT4G02570 ath Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.;cullin 1 transcript=eq;prot=eq; + 4 coding
AT4G12100 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1267 Blast hits to 1267 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 268; Plants - 230; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; - 4 coding
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