Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 12 of 227, showing 20 records out of 4526 total, starting on record 221, ending on 240

gene_id species description comment go evidence
AT5G62540 ath Encodes a protein predicted to be an E2 ubiquitin conjugating enzyme. It appears homologous to the RAD6 protein in yeast implicated in histone ubiquitination, but, UBC3 has not been experimentally associated with this process.;ubiquitin-conjugating enzyme 3 transcript=eq;prot=eq; GO:0006511 IDA
AT4G04690 ath F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G08750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; GO:0006511 TAS
AT3G61415 ath SKP1-like 21 (SK21); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex; EXPRESSED IN: stem, fruit, root, inflorescence, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 20 (TAIR:AT2G45950.1); Has 1341 Blast hits to 1337 proteins in 268 species: Archae - 0; Bacteria - 12; Metazoa - 524; Fungi - 168; Plants - 472; Viruses - 11; Other Eukaryotes - 154 (source: NCBI BLink).;SKP1-like 21 transcript=eq;prot=eq; GO:0006511 IEA
AT4G38930 ath Ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: ubiquitin fusion degradation 1 (TAIR:AT2G21270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Ubiquitin fusion degradation UFD1 family protein transcript=eq;prot=eq; GO:0006511 ISS
AT4G02570 ath Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.;cullin 1 transcript=eq;prot=eq; GO:0006511 IEA
AT3G06820 ath Mov34/MPN/PAD-1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: Mov34/MPN/PAD-1 family protein (TAIR:AT1G80210.1); Has 1006 Blast hits to 928 proteins in 230 species: Archae - 0; Bacteria - 7; Metazoa - 464; Fungi - 225; Plants - 185; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).;Mov34/MPN/PAD-1 family protein transcript=eq;prot=eq; GO:0006511 ISS
AT4G12100 ath Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1267 Blast hits to 1267 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 268; Plants - 230; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).;Cullin family protein transcript=eq;prot=eq; GO:0006511 IEA
AT1G47250 ath Encodes 20S proteasome subunit PAF2 (PAF2).;20S proteasome alpha subunit F2 transcript=eq;prot=eq; GO:0006511 TAS
AT2G29070 ath Ubiquitin fusion degradation UFD1 family protein; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin fusion degradation protein UFD1 (InterPro:IPR004854); BEST Arabidopsis thaliana protein match is: ubiquitin fusion degradation 1 (TAIR:AT2G21270.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Ubiquitin fusion degradation UFD1 family protein transcript=eq;prot=eq; GO:0006511 ISS
AT5G41700 ath One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2;ubiquitin conjugating enzyme 8 transcript=eq;prot=eq; GO:0006511 IDA
AT1G45050 ath member of ubiquitin-conjugating E2-proteins;Ubiquitin-conjugating enzyme family protein transcript=eq;prot=eq; GO:0006511 IDA
AT5G53300 ath Encodes a ubiquitin conjugating enzyme.;ubiquitin-conjugating enzyme 10 transcript=eq;prot=eq; GO:0006511 IDA
AT5G53360 ath TRAF-like superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT4G27880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;TRAF-like superfamily protein transcript=eq;prot=eq; GO:0006511 ISS
AT5G62800 ath Protein with RING/U-box and TRAF-like domains; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; INVOLVED IN: multicellular organismal development, protein ubiquitination, ubiquitin-dependent protein catabolic process; LOCATED IN: nucleus; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), Seven-in-absentia protein, TRAF-like domain (InterPro:IPR018121), Zinc finger, SIAH-type (InterPro:IPR013010), Seven In Absentia Homolog-type (InterPro:IPR013323), Seven-in-absentia protein, sina (InterPro:IPR004162); BEST Arabidopsis thaliana protein match is: Protein with RING/U-box and TRAF-like domains (TAIR:AT5G37890.1); Has 1629 Blast hits to 1618 proteins in 698 species: Archae - 0; Bacteria - 2; Metazoa - 1073; Fungi - 14; Plants - 491; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).;Protein with RING/U-box and TRAF-like domains transcript=eq;prot=eq; GO:0006511 ISS
AT2G35635 ath encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions.;ubiquitin 7 transcript=eq;prot=eq; GO:0006511 ISS
AT5G16310 ath UCH1; FUNCTIONS IN: ubiquitin thiolesterase activity; INVOLVED IN: shoot development, shoot morphogenesis, leaf development, ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular, nucleus, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (InterPro:IPR001578), Ubiquitinyl hydrolase, UCH37 type (InterPro:IPR017390); BEST Arabidopsis thaliana protein match is: Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 (TAIR:AT1G65650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 transcript=eq;prot=eq; GO:0006511 ISS
AT3G09790 ath encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions.;ubiquitin 8 transcript=eq;prot=eq; GO:0006511 ISS
AT3G24800 ath Contains two ring finger domains and one ZZ domain. Week similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis).;proteolysis 1 transcript=eq;prot=eq; GO:0006511 TAS
AT1G30950 ath Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY.;F-box family protein transcript=eq;prot=eq; GO:0006511 TAS
AT4G39910 ath Encodes a nuclear ubiquitin-specific protease.;ubiquitin-specific protease 3 transcript=eq;prot=eq; GO:0006511 IEA
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