Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 10 of 227, showing 20 records out of 4526 total, starting on record 181, ending on 200

gene_id species description comment go evidence
AT2G20160 ath MEIDOS (MEO); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 16 (TAIR:AT2G03190.1); Has 1353 Blast hits to 1351 proteins in 263 species: Archae - 0; Bacteria - 0; Metazoa - 502; Fungi - 168; Plants - 522; Viruses - 11; Other Eukaryotes - 150 (source: NCBI BLink).;E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein transcript=eq;prot=eq; GO:0006511 IEA
AT5G53840 ath F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT1G51370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;F-box/RNI-like/FBD-like domains-containing protein transcript=eq;prot=eq; GO:0006511 TAS
AT1G51290 ath F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G51320.1); Has 1610 Blast hits to 1571 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1609; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; GO:0006511 TAS
AT2G39940 ath Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.;RNI-like superfamily protein transcript=eq;prot=eq; GO:0006511 TAS
AT5G41340 ath Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated.;ubiquitin conjugating enzyme 4 transcript=eq;prot=eq; GO:0006511 IDA
AT1G51320 ath F-box and associated interaction domains-containing protein; FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G51290.1); Has 1646 Blast hits to 1614 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1644; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; GO:0006511 TAS
AT3G21860 ath SKP1-like 10 (SK10); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 9 (TAIR:AT3G21850.1); Has 1416 Blast hits to 1412 proteins in 266 species: Archae - 0; Bacteria - 0; Metazoa - 530; Fungi - 179; Plants - 530; Viruses - 11; Other Eukaryotes - 166 (source: NCBI BLink).;SKP1-like 10 transcript=eq;prot=eq; GO:0006511 TAS
AT3G21840 ath SKP1-like 7 (SK7); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 8 (TAIR:AT3G21830.1); Has 1302 Blast hits to 1298 proteins in 257 species: Archae - 0; Bacteria - 0; Metazoa - 505; Fungi - 171; Plants - 493; Viruses - 7; Other Eukaryotes - 126 (source: NCBI BLink).;SKP1-like 7 transcript=eq;prot=eq; GO:0006511 TAS
AT3G21850 ath one of Arabidopsis SKP1 homologues;SKP1-like 9 transcript=eq;prot=eq; GO:0006511 IEA
AT5G02920 ath F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G02930.1); Has 1950 Blast hits to 1934 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 28; Fungi - 9; Plants - 1909; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).;F-box/RNI-like superfamily protein transcript=eq;prot=eq; GO:0006511 TAS
AT3G21830 ath SKP1-like 8 (SK8); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 9 (TAIR:AT3G21850.1); Has 904 Blast hits to 850 proteins in 161 species: Archae - 9; Bacteria - 40; Metazoa - 431; Fungi - 54; Plants - 83; Viruses - 2; Other Eukaryotes - 285 (source: NCBI BLink).;SKP1-like 8 transcript=eq;prot=eq; GO:0006511 TAS
AT4G24820 ath 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome complex, nucleus, plasma membrane, proteasome regulatory particle, lid subcomplex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717), 26S proteasome, regulatory subunit Rpn7 (InterPro:IPR019585); BEST Arabidopsis thaliana protein match is: 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (TAIR:AT3G61140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain transcript=eq;prot=eq; GO:0006511 TAS
AT3G49600 ath Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.;ubiquitin-specific protease 26 transcript=eq;prot=eq; GO:0006511 IEA
AT4G24390 ath RNI-like superfamily protein; BEST Arabidopsis thaliana protein match is: auxin F-box protein 5 (TAIR:AT5G49980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;RNI-like superfamily protein transcript=eq;prot=eq; GO:0006511 TAS
AT5G06600 ath Encodes a ubiquitin-specific protease.;ubiquitin-specific protease 12 transcript=eq;prot=eq; GO:0006511 IEA
AT1G53790 ath F-box and associated interaction domains-containing protein; FUNCTIONS IN: endopeptidase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome core complex, alpha-subunit complex; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), Proteasome, alpha-subunit, conserved site (InterPro:IPR000426), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G31470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;F-box and associated interaction domains-containing protein transcript=eq;prot=eq; GO:0006511 IEA
AT5G50870 ath ubiquitin-conjugating enzyme 27 (UBC27); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin conjugating enzyme 8 (TAIR:AT5G41700.4).;ubiquitin-conjugating enzyme 27 transcript=eq;prot=eq; GO:0006511 IDA
AT3G55380 ath ubiquitin-conjugating enzyme 14 (UBC14); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin carrier protein 7 (TAIR:AT5G59300.1).;ubiquitin-conjugating enzyme 14 transcript=eq;prot=eq; GO:0006511 IDA
AT2G27630 ath Ubiquitin carboxyl-terminal hydrolase-related protein; FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT2G27650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Ubiquitin carboxyl-terminal hydrolase-related protein transcript=eq;prot=eq; GO:0006511 IEA
AT1G16470 ath Encodes 20S proteasome subunit PAB1 (PAB1).;proteasome subunit PAB1 transcript=eq;prot=eq; GO:0006511 TAS
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