Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 19 of 240, showing 20 records out of 4787 total, starting on record 361, ending on 380

gene_id species description comment go evidence
AT1G07745 ath Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.;homolog of RAD51 D transcript=eq;prot=eq; GO:0006281 IMP
AT4G25290 ath DNA photolyases;DNA photolyases; FUNCTIONS IN: DNA photolyase activity; INVOLVED IN: DNA repair; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G36530.1); Has 6717 Blast hits to 6715 proteins in 1229 species: Archae - 120; Bacteria - 4210; Metazoa - 285; Fungi - 40; Plants - 525; Viruses - 0; Other Eukaryotes - 1537 (source: NCBI BLink).;DNA photolyases;DNA photolyases transcript=eq;prot=eq; GO:0006281 ISS
AT5G58760 ath Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.;damaged DNA binding 2 transcript=eq;prot=eq; GO:0006281 IMP
AT5G46210 ath Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.;cullin4 transcript=eq;prot=eq; GO:0006281 IMP
AT1G30480 ath recombination and DNA-damage resistance protein (DRT111);D111/G-patch domain-containing protein transcript=eq;prot=eq; GO:0006281 IGI
AT1G05900 ath endonuclease III 2 (NTH2); CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Helix-hairpin-helix DNA-binding motif, class 1 (InterPro:IPR003583), Endonuclease III-like, iron-sulphur cluster loop motif (InterPro:IPR003651), Endonuclease III, conserved site-2 (InterPro:IPR004036), Helix-hairpin-helix motif (InterPro:IPR000445), HhH-GPD domain (InterPro:IPR003265); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT2G31450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;endonuclease III 2 transcript=eq;prot=eq; GO:0006281 IEA
AT5G50340 ath ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases; FUNCTIONS IN: in 7 functions; INVOLVED IN: DNA repair, proteolysis, DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, Lon C-terminal (InterPro:IPR008269), ATPase, AAA+ type, core (InterPro:IPR003593), DNA repair protein RadA (InterPro:IPR004504), DNA helicase, DnaB-like, C-terminal (InterPro:IPR007694), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); Has 8098 Blast hits to 8084 proteins in 2420 species: Archae - 172; Bacteria - 6133; Metazoa - 8; Fungi - 0; Plants - 82; Viruses - 9; Other Eukaryotes - 1694 (source: NCBI BLink).;ATP-dependent peptidases;nucleotide binding;serine-type endopeptidases;DNA helicases;ATP binding;damaged DNA binding;nucleoside-triphosphatases transcript=eq;prot=eq; GO:0006281 IEA
AT3G09100 ath mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;mRNA capping enzyme family protein transcript=eq;prot=eq; GO:0006281 IEA
AT2G30350 ath Excinuclease ABC, C subunit, N-terminal; FUNCTIONS IN: nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: intracellular; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Excinuclease ABC, C subunit, N-terminal (InterPro:IPR000305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;Excinuclease ABC, C subunit, N-terminal transcript=eq;prot=eq; GO:0006281 ISS
AT1G03190 ath UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.;RAD3-like DNA-binding helicase protein transcript=eq;prot=eq; GO:0006281 IMP
AT5G52882 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 40812 Blast hits to 38433 proteins in 3247 species: Archae - 1565; Bacteria - 18648; Metazoa - 4821; Fungi - 3639; Plants - 3257; Viruses - 39; Other Eukaryotes - 8843 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 IEA
AT3G22880 ath Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.;DNA repair (Rad51) family protein transcript=eq;prot=eq; GO:0006281 ISS
AT1G66730 ath Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.;DNA LIGASE 6 transcript=eq;prot=eq; GO:0006281 IMP
AT4G21070 ath Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.;breast cancer susceptibility1 transcript=eq;prot=eq; GO:0006281 IMP
AT1G10930 ath DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.;DNA helicase (RECQl4A) transcript=eq;prot=eq; GO:0006281 IEA
AT1G60930 ath AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.;RECQ helicase L4B transcript=ne;prot=eq; GO:0006281 IEA
AT3G19740 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G50140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 IEA
AT1G52500 ath Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.;MUTM homolog-1 transcript=eq;prot=eq; GO:0006281 IDA
AT3G48190 ath encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Characterization of mutants suggest a role in repairing DNA in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.;ataxia-telangiectasia mutated transcript=eq;prot=eq; GO:0006281 IMP
AT1G10520 ath DNA polymerase lambda (POLL); FUNCTIONS IN: DNA binding, DNA-directed DNA polymerase activity, catalytic activity, nucleotidyltransferase activity; INVOLVED IN: DNA repair, DNA replication; LOCATED IN: intracellular; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), DNA-directed DNA polymerase, family X, beta-like (InterPro:IPR002008), DNA-directed DNA polymerase, family X, beta-like, N-terminal (InterPro:IPR010996), DNA polymerase lambda, fingers domain (InterPro:IPR018944), DNA polymerase family X, binding site (InterPro:IPR019843), DNA-directed DNA polymerase X (InterPro:IPR002054), BRCT (InterPro:IPR001357), DNA polymerase X (InterPro:IPR022312); Has 1887 Blast hits to 1879 proteins in 557 species: Archae - 50; Bacteria - 688; Metazoa - 533; Fungi - 209; Plants - 50; Viruses - 7; Other Eukaryotes - 350 (source: NCBI BLink).;DNA polymerase lambda (POLL) transcript=eq;prot=eq; GO:0006281 IEA
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