Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 18 of 240, showing 20 records out of 4787 total, starting on record 341, ending on 360

gene_id species description comment go evidence
AT5G39770 ath Represents a non-function pseudogene homologous to AtMSU81 (At4g30870).;Restriction endonuclease, type II-like superfamily protein transcript=eq;prot=eq; GO:0006281 ISS
AT4G36050 ath endonuclease/exonuclease/phosphatase family protein; FUNCTIONS IN: zinc ion binding, nuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135), Exodeoxyribonuclease III xth (InterPro:IPR004808), Zinc finger, GRF-type (InterPro:IPR010666); BEST Arabidopsis thaliana protein match is: apurinic endonuclease-redox protein (TAIR:AT2G41460.1); Has 8559 Blast hits to 7505 proteins in 2283 species: Archae - 114; Bacteria - 4844; Metazoa - 586; Fungi - 501; Plants - 129; Viruses - 2; Other Eukaryotes - 2383 (source: NCBI BLink).;endonuclease/exonuclease/phosphatase family protein transcript=eq;prot=eq; GO:0006281 IEA
AT3G09840 ath Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation.;cell division cycle 48 transcript=eq;prot=eq; GO:0006281 IEA
AT3G19210 ath Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.;homolog of RAD54 transcript=eq;prot=eq; GO:0006281 ISS
AT1G64030 ath serpin 3 (SRP3); FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: DNA repair, response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: leaf whorl, sepal, fruit, flower, inflorescence; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT1G62170.1); Has 6508 Blast hits to 6454 proteins in 476 species: Archae - 66; Bacteria - 384; Metazoa - 5026; Fungi - 12; Plants - 344; Viruses - 461; Other Eukaryotes - 215 (source: NCBI BLink).;serpin 3 transcript=eq;prot=eq; GO:0006281 IMP
AT1G64110 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G28000.1); Has 45379 Blast hits to 42847 proteins in 3276 species: Archae - 1573; Bacteria - 21664; Metazoa - 5045; Fungi - 3902; Plants - 3254; Viruses - 30; Other Eukaryotes - 9911 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 IEA
AT2G45280 ath Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions.;RAS associated with diabetes protein 51C transcript=eq;prot=eq; GO:0006281 ISS
AT1G05055 ath Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.;general transcription factor II H2 transcript=eq;prot=eq; GO:0006281 IEA
AT5G44740 ath Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.;Y-family DNA polymerase H transcript=eq;prot=eq; GO:0006281 ISS
AT5G44750 ath Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).;DNA-directed DNA polymerases transcript=eq;prot=eq; GO:0006281 ISS
AT3G24320 ath Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation.;MUTL protein homolog 1 transcript=eq;prot=eq; GO:0006281 IEA
AT5G44680 ath DNA glycosylase superfamily protein; FUNCTIONS IN: DNA-3-methyladenine glycosylase I activity, catalytic activity; INVOLVED IN: DNA repair, base-excision repair; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA glycosylase (InterPro:IPR011257), Methyladenine glycosylase (InterPro:IPR005019); BEST Arabidopsis thaliana protein match is: DNA glycosylase superfamily protein (TAIR:AT3G12710.1); Has 3656 Blast hits to 3656 proteins in 1559 species: Archae - 10; Bacteria - 3140; Metazoa - 4; Fungi - 4; Plants - 168; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink).;DNA glycosylase superfamily protein transcript=eq;prot=eq; GO:0006281 ISS
AT2G47590 ath photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,;photolyase/blue-light receptor 2 transcript=eq;prot=eq; GO:0006281 ISS
AT1G05180 ath Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves.;NAD(P)-binding Rossmann-fold superfamily protein transcript=eq;prot=eq; GO:0006281 IMP
AT1G05460 ath Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 IEA
AT1G29630 ath 5'-3' exonuclease family protein; FUNCTIONS IN: DNA binding, catalytic activity, nuclease activity; INVOLVED IN: DNA repair; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: XPG conserved site (InterPro:IPR019974), XPG N-terminal (InterPro:IPR006085), DNA repair protein (XPGC)/yeast Rad (InterPro:IPR006084), 5'-3' exonuclease, C-terminal subdomain (InterPro:IPR020045), Helix-hairpin-helix motif, class 2 (InterPro:IPR008918), XPG/RAD2 endonuclease (InterPro:IPR006086); BEST Arabidopsis thaliana protein match is: 5'-3' exonuclease family protein (TAIR:AT1G18090.2); Has 2407 Blast hits to 2171 proteins in 377 species: Archae - 277; Bacteria - 0; Metazoa - 635; Fungi - 677; Plants - 227; Viruses - 36; Other Eukaryotes - 555 (source: NCBI BLink).;5'-3' exonuclease family protein transcript=eq;prot=eq; GO:0006281 ISS
AT4G31150 ath endonuclease V family protein; FUNCTIONS IN: endonuclease activity; INVOLVED IN: DNA repair; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease V (InterPro:IPR007581); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;endonuclease V family protein transcript=eq;prot=eq; GO:0006281 IEA
AT4G25120 ath Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3’- to 5’-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 IEA
AT5G07400 ath forkhead-associated domain-containing protein / FHA domain-containing protein; FUNCTIONS IN: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding; INVOLVED IN: DNA repair; LOCATED IN: nucleus; EXPRESSED IN: sperm cell, seed; EXPRESSED DURING: F mature embryo stage; CONTAINS InterPro DOMAIN/s: Tyrosyl-DNA phosphodiesterase (InterPro:IPR010347), SMAD/FHA domain (InterPro:IPR008984), Forkhead-associated (FHA) domain (InterPro:IPR000253), HIP116, Rad5p N-terminal (InterPro:IPR014905); BEST Arabidopsis thaliana protein match is: tyrosyl-DNA phosphodiesterase-related (TAIR:AT5G15170.1); Has 394 Blast hits to 361 proteins in 119 species: Archae - 0; Bacteria - 2; Metazoa - 165; Fungi - 89; Plants - 76; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).;forkhead-associated domain-containing protein / FHA domain-containing protein transcript=eq;prot=eq; GO:0006281 IEA
AT3G32920 ath P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: DNA repair, SOS response, DNA recombination, DNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: DNA recombination/repair protein RecA/RadB, ATP-binding domain (InterPro:IPR020588), ATPase, AAA+ type, core (InterPro:IPR003593), DNA recombination and repair protein RecA (InterPro:IPR013765), DNA recombination/repair protein RecA, monomer-monomer interface (InterPro:IPR020587); BEST Arabidopsis thaliana protein match is: recA DNA recombination family protein (TAIR:AT2G19490.1); Has 17255 Blast hits to 17200 proteins in 5414 species: Archae - 42; Bacteria - 14123; Metazoa - 1; Fungi - 5; Plants - 108; Viruses - 52; Other Eukaryotes - 2924 (source: NCBI BLink).;P-loop containing nucleoside triphosphate hydrolases superfamily protein transcript=eq;prot=eq; GO:0006281 ISS
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