Index of genes with 1 constraints:

GO term parent-child relationships are used in this table.

Page 4 of 262, showing 20 records out of 5235 total, starting on record 61, ending on 80

gene_id species description comment go evidence
AL3G03160 aly name=scaffold_300355.1;pid=896385;prot=eq;tid=927898 GO:0000175 IEA
AL1G38870 aly name=scaffold_104139.1;pid=891345;prot=eq;tid=922858 GO:0000175 IEA
AT5G02250 ath Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.;Ribonuclease II/R family protein transcript=eq;prot=eq; GO:0000175 IDA
AT3G61620 ath exonuclease RRP41 (RRP41);3'-5'-exoribonuclease family protein transcript=eq;prot=eq; GO:0000175 ISS
AT3G12990 ath Encodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis.;ribonuclease PH45A transcript=eq;prot=eq; GO:0000175 IGI
AT1G60080 ath 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1508 Blast hits to 1508 proteins in 331 species: Archae - 402; Bacteria - 40; Metazoa - 363; Fungi - 232; Plants - 181; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink).;3'-5'-exoribonuclease family protein transcript=eq;prot=eq; GO:0000175 ISS
AT2G47220 ath Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype;DOMAIN OF UNKNOWN FUNCTION 724 5 transcript=eq;prot=eq; GO:0000175 ISS
AT4G27490 ath 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink).;3'-5'-exoribonuclease family protein transcript=eq;prot=eq; GO:0000175 ISS
AT5G14580 ath polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink).;polyribonucleotide nucleotidyltransferase, putative transcript=eq;prot=eq; GO:0000175 ISS
AT3G46210 ath Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1); Has 6526 Blast hits to 6524 proteins in 2015 species: Archae - 242; Bacteria - 4366; Metazoa - 314; Fungi - 210; Plants - 230; Viruses - 0; Other Eukaryotes - 1164 (source: NCBI BLink).;Ribosomal protein S5 domain 2-like superfamily protein transcript=eq;prot=eq; GO:0000175 ISS
AT3G03710 ath Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.;polyribonucleotide nucleotidyltransferase, putative transcript=eq;prot=eq; GO:0000175 ISS
AT3G60500 ath Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.;3'-5'-exoribonuclease family protein transcript=eq;prot=eq; GO:0000175 IGI
AT3G07750 ath 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1493 Blast hits to 1491 proteins in 343 species: Archae - 294; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).;3'-5'-exoribonuclease family protein transcript=eq;prot=eq; GO:0000175 ISS
BD1G01100 bdi 3'-5'-exoribonuclease activity (Blast2GO) pid=Bradi1g01100.1;tid=Bradi1g01100.1;GeneName=Bradi1g01100;transcript=eq;prot=eq GO:0000175 IEA
BD4G19975 bdi pid=Bradi4g19975.1;tid=Bradi4g19975.1;GeneName=Bradi4g19975;transcript=eq;prot=eq GO:0000175 IEA
BD3G48860 bdi KH domain-containing protein similar to putative polyribonucleotide nucleotidyltransferase, Arabidopsis thaliana] AT5G14580 pid=Bradi3g48860.1;tid=Bradi3g48860.1;GeneName=Bradi3g48860;transcript=eq;prot=eq GO:0000175 IEA
BD1G20450 bdi 3'-5'-exoribonuclease activity (Blast2GO) pid=Bradi1g20450.1;tid=Bradi1g20450.1;GeneName=Bradi1g20450;transcript=eq;prot=eq GO:0000175 IEA
BD2G16910 bdi 3'-5'-exoribonuclease activity (Blast2GO) pid=Bradi2g16910.3;tid=Bradi2g16910.3;GeneName=Bradi2g16910;transcript=eq;prot=eq GO:0000175 IEA
BD3G45490 bdi 3'-5'-exoribonuclease activity (Blast2GO) pid=Bradi3g45490.1;tid=Bradi3g45490.1;GeneName=Bradi3g45490;transcript=eq;prot=eq GO:0000175 IEA
BD1G56280 bdi KH domain-containing protein similar to 3' exoribonuclease family domain 1 protein-related, [Arabidopsis thaliana] AT2G47220 pid=Bradi1g56280.1;tid=Bradi1g56280.1;GeneName=Bradi1g56280;transcript=eq;prot=eq GO:0000175 IEA
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