Index of genes with 1 constraints:
GO term parent-child relationships are used in this table.
- GO term : GO:0004518
GO term parent-child relationships are used in this table.
Page 4 of 262, showing 20 records out of 5235 total, starting on record 61, ending on 80
| gene_id | species | description | comment | go | evidence |
|---|---|---|---|---|---|
| AL3G03160 | aly | name=scaffold_300355.1;pid=896385;prot=eq;tid=927898 | GO:0000175 | IEA | |
| AL1G38870 | aly | name=scaffold_104139.1;pid=891345;prot=eq;tid=922858 | GO:0000175 | IEA | |
| AT5G02250 | ath | Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.;Ribonuclease II/R family protein | transcript=eq;prot=eq; | GO:0000175 | IDA |
| AT3G61620 | ath | exonuclease RRP41 (RRP41);3'-5'-exoribonuclease family protein | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT3G12990 | ath | Encodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis.;ribonuclease PH45A | transcript=eq;prot=eq; | GO:0000175 | IGI |
| AT1G60080 | ath | 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1508 Blast hits to 1508 proteins in 331 species: Archae - 402; Bacteria - 40; Metazoa - 363; Fungi - 232; Plants - 181; Viruses - 0; Other Eukaryotes - 290 (source: NCBI BLink).;3'-5'-exoribonuclease family protein | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT2G47220 | ath | Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype;DOMAIN OF UNKNOWN FUNCTION 724 5 | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT4G27490 | ath | 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: 3'-5'-exoribonuclease family protein (TAIR:AT3G61620.2); Has 6020 Blast hits to 6020 proteins in 1904 species: Archae - 333; Bacteria - 3622; Metazoa - 423; Fungi - 273; Plants - 197; Viruses - 0; Other Eukaryotes - 1172 (source: NCBI BLink).;3'-5'-exoribonuclease family protein | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT5G14580 | ath | polyribonucleotide nucleotidyltransferase, putative; FUNCTIONS IN: polyribonucleotide nucleotidyltransferase activity, 3'-5'-exoribonuclease activity, RNA binding, nucleic acid binding; INVOLVED IN: mRNA catabolic process, RNA processing; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: K Homology, type 1, subgroup (InterPro:IPR018111), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Ribosomal protein S1, RNA-binding domain (InterPro:IPR003029), Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type (InterPro:IPR015848), K Homology (InterPro:IPR004087), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Polyribonucleotide nucleotidyltransferase (InterPro:IPR012162); BEST Arabidopsis thaliana protein match is: polyribonucleotide nucleotidyltransferase, putative (TAIR:AT3G03710.1); Has 30004 Blast hits to 26962 proteins in 2901 species: Archae - 317; Bacteria - 19794; Metazoa - 489; Fungi - 141; Plants - 452; Viruses - 0; Other Eukaryotes - 8811 (source: NCBI BLink).;polyribonucleotide nucleotidyltransferase, putative | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT3G46210 | ath | Ribosomal protein S5 domain 2-like superfamily protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G07110.1); Has 6526 Blast hits to 6524 proteins in 2015 species: Archae - 242; Bacteria - 4366; Metazoa - 314; Fungi - 210; Plants - 230; Viruses - 0; Other Eukaryotes - 1164 (source: NCBI BLink).;Ribosomal protein S5 domain 2-like superfamily protein | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT3G03710 | ath | Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.;polyribonucleotide nucleotidyltransferase, putative | transcript=eq;prot=eq; | GO:0000175 | ISS |
| AT3G60500 | ath | Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.;3'-5'-exoribonuclease family protein | transcript=eq;prot=eq; | GO:0000175 | IGI |
| AT3G07750 | ath | 3'-5'-exoribonuclease family protein; FUNCTIONS IN: 3'-5'-exoribonuclease activity, RNA binding; INVOLVED IN: RNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 2 (InterPro:IPR015847), Exoribonuclease, phosphorolytic domain 1 (InterPro:IPR001247), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568); BEST Arabidopsis thaliana protein match is: ribonuclease PH45A (TAIR:AT3G12990.3); Has 1493 Blast hits to 1491 proteins in 343 species: Archae - 294; Bacteria - 54; Metazoa - 354; Fungi - 315; Plants - 185; Viruses - 0; Other Eukaryotes - 291 (source: NCBI BLink).;3'-5'-exoribonuclease family protein | transcript=eq;prot=eq; | GO:0000175 | ISS |
| BD1G01100 | bdi | 3'-5'-exoribonuclease activity (Blast2GO) | pid=Bradi1g01100.1;tid=Bradi1g01100.1;GeneName=Bradi1g01100;transcript=eq;prot=eq | GO:0000175 | IEA |
| BD4G19975 | bdi | pid=Bradi4g19975.1;tid=Bradi4g19975.1;GeneName=Bradi4g19975;transcript=eq;prot=eq | GO:0000175 | IEA | |
| BD3G48860 | bdi | KH domain-containing protein similar to putative polyribonucleotide nucleotidyltransferase, Arabidopsis thaliana] AT5G14580 | pid=Bradi3g48860.1;tid=Bradi3g48860.1;GeneName=Bradi3g48860;transcript=eq;prot=eq | GO:0000175 | IEA |
| BD1G20450 | bdi | 3'-5'-exoribonuclease activity (Blast2GO) | pid=Bradi1g20450.1;tid=Bradi1g20450.1;GeneName=Bradi1g20450;transcript=eq;prot=eq | GO:0000175 | IEA |
| BD2G16910 | bdi | 3'-5'-exoribonuclease activity (Blast2GO) | pid=Bradi2g16910.3;tid=Bradi2g16910.3;GeneName=Bradi2g16910;transcript=eq;prot=eq | GO:0000175 | IEA |
| BD3G45490 | bdi | 3'-5'-exoribonuclease activity (Blast2GO) | pid=Bradi3g45490.1;tid=Bradi3g45490.1;GeneName=Bradi3g45490;transcript=eq;prot=eq | GO:0000175 | IEA |
| BD1G56280 | bdi | KH domain-containing protein similar to 3' exoribonuclease family domain 1 protein-related, [Arabidopsis thaliana] AT2G47220 | pid=Bradi1g56280.1;tid=Bradi1g56280.1;GeneName=Bradi1g56280;transcript=eq;prot=eq | GO:0000175 | IEA |