Index of genes with 1 constraints:
- gene family : HOM000283
Page 2 of 15, showing 20 records out of 292 total, starting on record 21, ending on 40
| gene_id | species | description | comment | strand | chr | outlier |
|---|---|---|---|---|---|---|
| AT1G26830 | ath | Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.;cullin 3 | transcript=eq;prot=eq; | + | 1 | No |
| AT1G43140 | ath | Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: endomembrane system, cullin-RING ubiquitin ligase complex; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 2 (TAIR:AT1G02980.1); Has 2163 Blast hits to 2131 proteins in 224 species: Archae - 0; Bacteria - 0; Metazoa - 935; Fungi - 457; Plants - 383; Viruses - 0; Other Eukaryotes - 388 (source: NCBI BLink).;Cullin family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G59790 | ath | Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin 1 (TAIR:AT4G02570.4); Has 1509 Blast hits to 1507 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 762; Fungi - 308; Plants - 286; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).;Cullin family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G59800 | ath | Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G59790.1); Has 1434 Blast hits to 1434 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 729; Fungi - 306; Plants - 271; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).;Cullin family protein | transcript=eq;prot=eq; | + | 1 | No |
| AT1G69670 | ath | cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.;cullin 3B | transcript=eq;prot=eq; | - | 1 | No |
| AT3G46910 | ath | Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 524 Blast hits to 524 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 63; Plants - 121; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink).;Cullin family protein | transcript=eq;prot=eq; | + | 3 | No |
| AT3G55160 | ath | unknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). | transcript=eq;prot=eq; | - | 3 | Yes |
| AT4G02570 | ath | Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.;cullin 1 | transcript=eq;prot=eq; | + | 4 | No |
| AT4G12100 | ath | Cullin family protein; FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cullin-RING ubiquitin ligase complex; CONTAINS InterPro DOMAIN/s: Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: cullin4 (TAIR:AT5G46210.1); Has 1267 Blast hits to 1267 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 680; Fungi - 268; Plants - 230; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).;Cullin family protein | transcript=eq;prot=eq; | - | 4 | No |
| AT5G46210 | ath | Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.;cullin4 | transcript=eq;prot=eq; | - | 5 | No |
| BD1G06387 | bdi | pid=Bradi1g06387.1;tid=Bradi1g06387.1;GeneName=Bradi1g06387;transcript=eq;prot=eq | - | Bd1 | No | |
| BD2G12970 | bdi | Cullin, subfamily cullin, putative | pid=Bradi2g12970.1;tid=Bradi2g12970.1;GeneName=Bradi2g12970;transcript=eq;prot=eq | + | Bd2 | No |
| BD2G35820 | bdi | Cullin, subfamily cullin, putative | pid=Bradi2g35820.1;tid=Bradi2g35820.1;GeneName=Bradi2g35820;transcript=eq;prot=eq | + | Bd2 | No |
| BD2G35830 | bdi | Cullin, subfamily cullin, putative | pid=Bradi2g35830.1;tid=Bradi2g35830.1;GeneName=Bradi2g35830;transcript=eq;prot=eq | + | Bd2 | No |
| BD2G60057 | bdi | pid=Bradi2g60057.1;tid=Bradi2g60057.1;GeneName=Bradi2g60057;transcript=eq;prot=eq | + | Bd2 | No | |
| BD3G15900 | bdi | Cullin, subfamily cullin, putative | pid=Bradi3g15900.1;tid=Bradi3g15900.1;GeneName=Bradi3g15900;transcript=eq;prot=eq | + | Bd3 | No |
| BD3G15920 | bdi | pid=Bradi3g15920.1;tid=Bradi3g15920.1;GeneName=Bradi3g15920;transcript=eq;prot=eq | + | Bd3 | Yes | |
| BD3G59330 | bdi | Cullin, subfamily cullin, putative | pid=Bradi3g59330.1;tid=Bradi3g59330.1;GeneName=Bradi3g59330;transcript=eq;prot=eq | + | Bd3 | No |
| BD5G23640 | bdi | Cullin, subfamily cullin, putative | pid=Bradi5g23640.1;tid=Bradi5g23640.1;GeneName=Bradi5g23640;transcript=eq;prot=eq | + | Bd5 | No |
| BD5G23650 | bdi | Cullin, subfamily cullin, putative | pid=Bradi5g23650.1;tid=Bradi5g23650.1;GeneName=Bradi5g23650;transcript=eq;prot=eq | + | Bd5 | No |