Index of genes with 2 constraints:
View genome wide organization

Page 1 of 1, showing 11 records out of 11 total, starting on record 1, ending on 11

gene_id species description comment strand chr outlier
AT1G57730 ath RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G70910.1); Has 6244 Blast hits to 6227 proteins in 273 species: Archae - 0; Bacteria - 6; Metazoa - 1193; Fungi - 431; Plants - 3759; Viruses - 41; Other Eukaryotes - 814 (source: NCBI BLink).;RING/U-box superfamily protein transcript=eq;prot=eq; - 1 No
AT2G24285 ath BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 26 Blast hits to 26 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; - 2 No
AT2G24460 ath BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 32 Blast hits to 32 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; + 2 No
AT2G24480 ath Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT3G28620.1); Has 6257 Blast hits to 6243 proteins in 252 species: Archae - 0; Bacteria - 2; Metazoa - 1500; Fungi - 418; Plants - 3605; Viruses - 31; Other Eukaryotes - 701 (source: NCBI BLink).;Zinc finger, C3HC4 type (RING finger) family protein transcript=eq;prot=eq; + 2 No
AT2G25565 ath BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 27 Blast hits to 27 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; - 2 No
AT3G28620 ath Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT5G43200.1); Has 7635 Blast hits to 7616 proteins in 271 species: Archae - 0; Bacteria - 6; Metazoa - 1933; Fungi - 653; Plants - 3895; Viruses - 30; Other Eukaryotes - 1118 (source: NCBI BLink).;Zinc finger, C3HC4 type (RING finger) family protein transcript=eq;prot=eq; + 3 No
AT3G42940 ath BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT2G24480.1); Has 66 Blast hits to 66 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). transcript=eq;prot=eq; + 3 No
AT5G37200 ath RING/U-box superfamily protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RING/U-box superfamily protein transcript=eq;prot=eq; + 5 No
AT5G37220 ath RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RING/U-box superfamily protein transcript=eq;prot=eq; + 5 No
AT5G37280 ath RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G37200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RING/U-box superfamily protein transcript=eq;prot=eq; - 5 No
AT5G43200 ath Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT3G28620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Zinc finger, C3HC4 type (RING finger) family protein transcript=eq;prot=eq; - 5 No
<< previous
next >>

Download genes

Include following columns
gene_id
species
description
comment
strand
chr
outlier