Anchorpoints
- Gene id
- VV19G05430
- Organism
- Vitis vinifera
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL3G13630 scaffold_3 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT3G13170 Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.;Spo11/DNA topoisomerase VI, subunit A protein 3 - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00012G01620 supercontig_12 + View CP00012G01630 supercontig_12 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV2G42610 Meiotic recombination protein SPO11-1 (AtSPO11-1) (similar to) LG2 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM02G46920 02 Gm02 - View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD11G016320 11 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME03332G00650 scaffold03332 - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT01G36780 PACid=17329982;name=POPTR_0001s37540;alias=pt039038m,eugene3.00012639; scaffold_1 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29629G00410 29629 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC07G001390 Tc07 + View
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL3G13630 | scaffold_3 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G13170 | Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.;Spo11/DNA topoisomerase VI, subunit A protein | 3 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00012G01620 | supercontig_12 | + | View | |
| CP00012G01630 | supercontig_12 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV2G42610 | Meiotic recombination protein SPO11-1 (AtSPO11-1) (similar to) | LG2 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM02G46920 | 02 | Gm02 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD11G016320 | 11 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03332G00650 | scaffold03332 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G36780 | PACid=17329982;name=POPTR_0001s37540;alias=pt039038m,eugene3.00012639; | scaffold_1 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29629G00410 | 29629 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC07G001390 | Tc07 | + | View |