Anchorpoints
- Gene id
- TC09G011710
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL4G29270 scaffold_4 + View AL4G29280 scaffold_4 + View AL4G29290 scaffold_4 + View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT2G42090 actin related gene or pseudogene, based on sequence divergence and lack of expression;actin 9 2 + View AT2G42100 Actin-like ATPase superfamily protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 15158 Blast hits to 14731 proteins in 3038 species: Archae - 6; Bacteria - 6; Metazoa - 5717; Fungi - 5232; Plants - 1603; Viruses - 2; Other Eukaryotes - 2592 (source: NCBI BLink).;Actin-like ATPase superfamily protein 2 + View AT2G42170 Actin family protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; EXPRESSED IN: vascular bundle; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 13233 Blast hits to 12851 proteins in 2620 species: Archae - 6; Bacteria - 13; Metazoa - 5650; Fungi - 3392; Plants - 1602; Viruses - 2; Other Eukaryotes - 2568 (source: NCBI BLink).;Actin family protein 2 + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00046G00240 supercontig_46 - View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV1G05080 Actin-related protein 6 (putative) LG1 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD02G002800 2 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME05884G00140 scaffold05884 - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT18G11890 PACid=17340374;name=POPTR_0018s12840;alias=pt008608m; scaffold_18 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29927G00190 29927 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV11G06620 name=GSVIVG01015556001; chr11 - View
Zea mays
Gene id
Description
Chromosome
Strand
Multiplicon
ZM05G09020 actin-2 5 + View
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL4G29270 | scaffold_4 | + | View | |
| AL4G29280 | scaffold_4 | + | View | |
| AL4G29290 | scaffold_4 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G42090 | actin related gene or pseudogene, based on sequence divergence and lack of expression;actin 9 | 2 | + | View |
| AT2G42100 | Actin-like ATPase superfamily protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin-11 (TAIR:AT3G12110.1); Has 15158 Blast hits to 14731 proteins in 3038 species: Archae - 6; Bacteria - 6; Metazoa - 5717; Fungi - 5232; Plants - 1603; Viruses - 2; Other Eukaryotes - 2592 (source: NCBI BLink).;Actin-like ATPase superfamily protein | 2 | + | View |
| AT2G42170 | Actin family protein; FUNCTIONS IN: structural constituent of cytoskeleton, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: actin cytoskeleton; EXPRESSED IN: vascular bundle; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000); BEST Arabidopsis thaliana protein match is: Actin-like ATPase superfamily protein (TAIR:AT2G42100.1); Has 13233 Blast hits to 12851 proteins in 2620 species: Archae - 6; Bacteria - 13; Metazoa - 5650; Fungi - 3392; Plants - 1602; Viruses - 2; Other Eukaryotes - 2568 (source: NCBI BLink).;Actin family protein | 2 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00046G00240 | supercontig_46 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G05080 | Actin-related protein 6 (putative) | LG1 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD02G002800 | 2 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME05884G00140 | scaffold05884 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT18G11890 | PACid=17340374;name=POPTR_0018s12840;alias=pt008608m; | scaffold_18 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29927G00190 | 29927 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV11G06620 | name=GSVIVG01015556001; | chr11 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM05G09020 | actin-2 | 5 | + | View |