Anchorpoints

Gene id
TC06G008670
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G47180scaffold_1-View
AL3G17090scaffold_3+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G16100RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink).;RAB GTPase homolog G3C3+View
AT1G52280RAB GTPase homolog G3D (RABG3d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3C (TAIR:AT3G16100.1); Has 26220 Blast hits to 26194 proteins in 779 species: Archae - 32; Bacteria - 221; Metazoa - 13502; Fungi - 3923; Plants - 2848; Viruses - 20; Other Eukaryotes - 5674 (source: NCBI BLink).;RAB GTPase homolog G3D1-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G07570GTPase activity (Blast2GO)Bd2+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G16130Ras-related protein Rab7LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G2194008Gm08-View
GM05G3540005Gm05+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD17G01530017-View
MD17G01537017-View
MD17G01547017-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME10797G00480scaffold10797-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT6G087980Rac-like GTP-binding protein 4 (AHRD V1 **** B6TYX5_MAIZE); contains Interpro domain(s) IPR003578 Ras small GTPase, Rho type6-View
MT2G101890Ras-related protein Rab7 (AHRD V1 ***- B6UEL3_MAIZE); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type2-View
MT2G102060Ras-related protein Rab-5C (AHRD V1 ***- Q98932); contains Interpro domain(s) IPR015599 Rab5-related2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G12730ras%2Drelated protein, putative, expressed1+View
OS01G12900ras%2Drelated protein, putative, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G11750source=BGI China;type=FgeneSH;Chr01+View
OSINDICA_01G12010source=BGI China;type=FgeneSH;Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G04280PACid=17312883;name=POPTR_0003s05230;alias=pt024046m,estExt_fgenesh4_kg.C_LG_III0011;scaffold_3+View
PT03G04420PACid=17326055;name=POPTR_0003s05370;alias=pt024085m,estExt_fgenesh4_pm.C_LG_III0107;scaffold_3-View
PT01G18140PACid=17306766;name=POPTR_0001s18330;alias=pt040192m,estExt_fgenesh4_pg.C_LG_I1368;scaffold_1-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30146G0159030146-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G0010853chr_3-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G04890name=GSVIVG01017061001;chr9+View


Download

Gene id
Species
Description
Chromosome
Strand