Anchorpoints

Gene id
TC05G005760
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G22890scaffold_4-View
AL5G25070scaffold_5+View
AL6G01950scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G02860Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G18940.1); Has 78068 Blast hits to 16233 proteins in 339 species: Archae - 4; Bacteria - 143; Metazoa - 1692; Fungi - 1544; Plants - 71427; Viruses - 0; Other Eukaryotes - 3258 (source: NCBI BLink).;Pentatricopeptide repeat (PPR) superfamily protein5+View
AT2G37230Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02060.1); Has 41954 Blast hits to 13568 proteins in 300 species: Archae - 4; Bacteria - 36; Metazoa - 406; Fungi - 591; Plants - 39794; Viruses - 0; Other Eukaryotes - 1123 (source: NCBI BLink).;Tetratricopeptide repeat (TPR)-like superfamily protein2-View
AT3G54980Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: LATERAL ORGAN JUNCTION (TAIR:AT2G39230.1); Has 66577 Blast hits to 14412 proteins in 313 species: Archae - 5; Bacteria - 80; Metazoa - 1084; Fungi - 1336; Plants - 61678; Viruses - 0; Other Eukaryotes - 2394 (source: NCBI BLink).;Pentatricopeptide repeat (PPR) superfamily protein3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G65860Bd1+View
BD2G54110Bd2+View
BD2G54360nuclear hormone receptor binding (Blast2GO)Bd2-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G14630Pentatricopeptide repeat-containing protein At5g02830, chloroplastic, Precursor (putative)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM19G3614019Gm19-View
GM03G3341003Gm03-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G048650chr1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04651G00200scaffold04651-View
ME07351G00090scaffold07351+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G100550Pentatricopeptide repeat-containing protein At5g02830, chloroplastic (AHRD V1 ***- Q8GYL7); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat7-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G17634PPR repeat domain containing protein, putative, expressed3-View
OS01G05860PPR repeat domain containing protein, putative, expressed1+View
OS01G06000PPR repeat containing protein, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G16240source=BGI China;type=FgeneSH;Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G13310PACid=17304293;name=POPTR_0006s13500;alias=pt017091m,fgenesh4_pm.C_scaffold_28000055;scaffold_6-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G0389003chr_3+View
SB01G0387701chr_1+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G01590name=GSVIVG01025524001;chr8+View
VV08G01680name=GSVIVG01025536001;chr8+View
VV08G01720name=GSVIVG01025541001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G233709+View


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Gene id
Species
Description
Chromosome
Strand