Anchorpoints

Gene id
TC05G005080
Organism
Theobroma cacao

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TC09G032200Tc09+View
TC10G003730Tc10+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G14300scaffold_5+View
AL5G23640scaffold_5-View
AL8G26020scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G59840Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Ras-related small GTP-binding family protein5-View
AT3G53610GTPase AtRAB8 (atrab8);RAB GTPase homolog 83-View
AT3G46060small GTP-binding protein (ara-3);RAB GTPase homolog 8A3+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G23120GTPase activity (Blast2GO)Bd2+View
BD1G03820GTPase activity (Blast2GO)Bd1-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00190G00270supercontig_190+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G31900Ras-related protein ARA-3 (similar to)scf0513178+View
FV6G13740Ras-related protein ARA-3 (similar to)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G5245018Gm18-View
GM13G4087013Gm13-View
GM10G3412010Gm10-View
GM15G0178015Gm15+View
GM04G3903004Gm04-View
GM10G4359010Gm10+View
GM02G1045002Gm02+View
GM15G0456015Gm15+View
GM12G0707012Gm12+View
GM11G1512011Gm11+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ5G031480chr5-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD04G0087904-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06705G00550scaffold06705-View
ME03687G00030scaffold03687-View
ME03687G00040scaffold03687-View
ME08265G01680scaffold08265-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G100020Ras-like protein (Fragment) (AHRD V1 *-*- Q8SAF8_9STRA); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type7+View
MT2G096550Ras-related protein ARA-3 (AHRD V1 ***- P28186); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type2-View
MT4G063160Small GTP-binding protein (AHRD V1 **-* Q41022_PEA); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G60530ras%2Drelated protein, putative, expressed3+View
OS03G60870ras%2Drelated protein, putative, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G57740source=BGI China;type=FgeneSH;Chr03+View
OSINDICA_03G58050source=BGI China;type=FgeneSH;Chr03-View
OSINDICA_05G34460source=BGI China;type=FgeneSH;Chr05-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G23530PACid=17309775;name=POPTR_0001s24290;alias=pt040115m,Pt-RAB8.2,estExt_fgenesh4_pm.C_LG_I0698;scaffold_1-View
PT10G20460PACid=17315476;name=POPTR_0010s21600;alias=pt013558m;scaffold_10+View
PT08G04970PACid=17323535;name=POPTR_0008s05160;alias=pt028447m;scaffold_8-View
PT09G03110PACid=17319023;name=POPTR_0009s03300;alias=pt005127m,estExt_Genewise1_v1.C_LG_IX4312,Pt-RAB8.1;scaffold_9-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G0226709chr_9-View
SB01G0033101chr_1-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04090name=GSVIVG01025028001;chr6-View
VV13G05680name=GSVIVG01016596001;chr13-View
VV08G02360name=GSVIVG01025619001;chr8+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G35320Putative uncharacterized protein 5+View


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Gene id
Species
Description
Chromosome
Strand