Anchorpoints
- Gene id
- TC01G039330
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
TC03G024470 Tc03 - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL8G00710 scaffold_8 + View AL7G25450 scaffold_7 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT5G47210 Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Hyaluronan / mRNA binding family 5 - View AT4G17520 Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink).;Hyaluronan / mRNA binding family 4 + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00022G00630 supercontig_22 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV7G12860 Histidine-rich glycoprotein, Precursor (probable) LG7 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM09G37850 09 Gm09 + View GM07G13900 07 Gm07 - View GM18G48620 18 Gm18 - View GM03G26100 03 Gm03 - View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD07G007950 7 + View MD02G021110 2 - View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME11581G01010 scaffold11581 + View ME08265G04320 scaffold08265 - View ME11341G00440 scaffold11341 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT02G13730 PACid=17344148;name=POPTR_0002s13920;alias=pt020852m,estExt_fgenesh4_pm.C_LG_II0615; scaffold_2 + View PT01G15100 PACid=17310770;name=POPTR_0001s15290;alias=pt038972m,estExt_fgenesh4_pm.C_290040; scaffold_1 - View PT14G04630 PACid=17333970;name=POPTR_0014s04820;alias=pt035697m; scaffold_14 + View PT03G07000 PACid=17313455;name=POPTR_0003s07950;alias=pt023517m,estExt_fgenesh4_pm.C_LG_III0192; scaffold_3 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC30174G00010 30174 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV15G01230 name=GSVIVG01018290001; chr15 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC03G024470 | Tc03 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL8G00710 | scaffold_8 | + | View | |
| AL7G25450 | scaffold_7 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G47210 | Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT4G17520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Hyaluronan / mRNA binding family | 5 | - | View |
| AT4G17520 | Hyaluronan / mRNA binding family; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Stm1, N-terminal (InterPro:IPR019084), Hyaluronan/mRNA-binding protein (InterPro:IPR006861); BEST Arabidopsis thaliana protein match is: Hyaluronan / mRNA binding family (TAIR:AT5G47210.1); Has 14577 Blast hits to 9436 proteins in 968 species: Archae - 15; Bacteria - 3155; Metazoa - 5443; Fungi - 1433; Plants - 1957; Viruses - 142; Other Eukaryotes - 2432 (source: NCBI BLink).;Hyaluronan / mRNA binding family | 4 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00022G00630 | supercontig_22 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G12860 | Histidine-rich glycoprotein, Precursor (probable) | LG7 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM09G37850 | 09 | Gm09 | + | View |
| GM07G13900 | 07 | Gm07 | - | View |
| GM18G48620 | 18 | Gm18 | - | View |
| GM03G26100 | 03 | Gm03 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD07G007950 | 7 | + | View | |
| MD02G021110 | 2 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11581G01010 | scaffold11581 | + | View | |
| ME08265G04320 | scaffold08265 | - | View | |
| ME11341G00440 | scaffold11341 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G13730 | PACid=17344148;name=POPTR_0002s13920;alias=pt020852m,estExt_fgenesh4_pm.C_LG_II0615; | scaffold_2 | + | View |
| PT01G15100 | PACid=17310770;name=POPTR_0001s15290;alias=pt038972m,estExt_fgenesh4_pm.C_290040; | scaffold_1 | - | View |
| PT14G04630 | PACid=17333970;name=POPTR_0014s04820;alias=pt035697m; | scaffold_14 | + | View |
| PT03G07000 | PACid=17313455;name=POPTR_0003s07950;alias=pt023517m,estExt_fgenesh4_pm.C_LG_III0192; | scaffold_3 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30174G00010 | 30174 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV15G01230 | name=GSVIVG01018290001; | chr15 | - | View |