Anchorpoints
- Gene id
- TC01G034070
- Organism
- Theobroma cacao
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL1G01150 scaffold_1 + View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G01200 RAB GTPase homolog A3 (RABA3); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, nucleus, cell plate; EXPRESSED IN: lateral root cap, hypocotyl, root, flower, epidermis; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 27164 Blast hits to 27137 proteins in 734 species: Archae - 19; Bacteria - 134; Metazoa - 14292; Fungi - 3779; Plants - 3194; Viruses - 20; Other Eukaryotes - 5726 (source: NCBI BLink).;RAB GTPase homolog A3 1 - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00096G00680 supercontig_96 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV7G04830 Ras-related protein Rab11D (similar to) LG7 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM16G02460 16 Gm16 - View GM03G42030 03 Gm03 + View GM07G05860 07 Gm07 - View GM19G44730 19 Gm19 + View
Lotus japonicus
Gene id
Description
Chromosome
Strand
Multiplicon
LJ1G057040 chr1 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD07G013490 7 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME03581G00430 scaffold03581 - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT7G117910 Ras-related GTP-binding protein (Fragment) (AHRD V1 *-** Q0WNE9_ARATH); contains Interpro domain(s) IPR015595 Rab11-related 7 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT14G09580 PACid=17338654;name=POPTR_0014s09770;alias=pt036083m,gw1.XIV.1826.1; scaffold_14 + View PT02G17430 PACid=17344476;name=POPTR_0002s17620;alias=pt021397m,eugene3.00021627; scaffold_2 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC28014G00010 28014 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV15G07110 name=GSVIVG01027396001; chr15 - View
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G01150 | scaffold_1 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G01200 | RAB GTPase homolog A3 (RABA3); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, nucleus, cell plate; EXPRESSED IN: lateral root cap, hypocotyl, root, flower, epidermis; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 27164 Blast hits to 27137 proteins in 734 species: Archae - 19; Bacteria - 134; Metazoa - 14292; Fungi - 3779; Plants - 3194; Viruses - 20; Other Eukaryotes - 5726 (source: NCBI BLink).;RAB GTPase homolog A3 | 1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00096G00680 | supercontig_96 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G04830 | Ras-related protein Rab11D (similar to) | LG7 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM16G02460 | 16 | Gm16 | - | View |
| GM03G42030 | 03 | Gm03 | + | View |
| GM07G05860 | 07 | Gm07 | - | View |
| GM19G44730 | 19 | Gm19 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ1G057040 | chr1 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD07G013490 | 7 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME03581G00430 | scaffold03581 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT7G117910 | Ras-related GTP-binding protein (Fragment) (AHRD V1 *-** Q0WNE9_ARATH); contains Interpro domain(s) IPR015595 Rab11-related | 7 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT14G09580 | PACid=17338654;name=POPTR_0014s09770;alias=pt036083m,gw1.XIV.1826.1; | scaffold_14 | + | View |
| PT02G17430 | PACid=17344476;name=POPTR_0002s17620;alias=pt021397m,eugene3.00021627; | scaffold_2 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC28014G00010 | 28014 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV15G07110 | name=GSVIVG01027396001; | chr15 | - | View |