Anchorpoints
- Gene id
- RC29646G00630
- Organism
- Ricinus communis
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
RC29900G00160 29900 - View RC29900G00180 29900 - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL8G02380 scaffold_8 - View AL7G24270 scaffold_7 + View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT4G18430 RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E 4 - View AT5G03520 RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C 5 + View AT5G03530 Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A 5 - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00007G00910 supercontig_7 - View CP00209G00020 supercontig_209 - View CP00131G00800 supercontig_131 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV6G22330 Rac-like GTP-binding protein RAC2, Precursor (similar to) LG6 - View FV3G13420 Ras-related protein Rab11B (similar to) LG3 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM06G43830 06 Gm06 + View GM12G14070 12 Gm12 - View GM12G14090 12 Gm12 - View GM12G33550 12 Gm12 - View GM12G33560 12 Gm12 - View GM13G36900 13 Gm13 + View GM13G36910 13 Gm13 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD05G004950 5 - View MD10G022990 10 + View MD11G023210 11 - View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME06918G00130 scaffold06918 + View ME06918G00150 scaffold06918 + View ME04851G00670 scaffold04851 - View ME04851G00690 scaffold04851 - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT4G079350 GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related 4 - View MT2G014990 GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related 2 - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT01G37540 PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926; scaffold_1 - View PT13G12170 PACid=17339540;name=POPTR_0013s12740;alias=pt031181m,grail3.0142006701,Pt-RAB11.8; scaffold_13 - View PT13G12190 PACid=17338863;name=POPTR_0013s12760;alias=pt031227m,estExt_Genewise1_v1.C_1420243; scaffold_13 - View PT19G11070 PACid=17312362;name=POPTR_0019s12210;alias=pt010379m,estExt_Genewise1_v1.C_LG_XIX2288; scaffold_19 + View PT19G11090 PACid=17330397;name=POPTR_0019s12230;alias=pt010347m,eugene3.00190842,Pt-RAB11.11; scaffold_19 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC06G015030 Tc06 + View TC06G015050 Tc06 + View TC07G009100 Tc07 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV19G02220 name=GSVIVG01014250001; chr19 + View VV12G02380 name=GSVIVG01020651001; chr12 + View VV12G02400 name=GSVIVG01020653001; chr12 + View VV10G01640 name=GSVIVG01021143001; chr10 - View VV10G01660 name=GSVIVG01021145001; chr10 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29900G00160 | 29900 | - | View | |
| RC29900G00180 | 29900 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL8G02380 | scaffold_8 | - | View | |
| AL7G24270 | scaffold_7 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G18430 | RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E | 4 | - | View |
| AT5G03520 | RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C | 5 | + | View |
| AT5G03530 | Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A | 5 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00007G00910 | supercontig_7 | - | View | |
| CP00209G00020 | supercontig_209 | - | View | |
| CP00131G00800 | supercontig_131 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV6G22330 | Rac-like GTP-binding protein RAC2, Precursor (similar to) | LG6 | - | View |
| FV3G13420 | Ras-related protein Rab11B (similar to) | LG3 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM06G43830 | 06 | Gm06 | + | View |
| GM12G14070 | 12 | Gm12 | - | View |
| GM12G14090 | 12 | Gm12 | - | View |
| GM12G33550 | 12 | Gm12 | - | View |
| GM12G33560 | 12 | Gm12 | - | View |
| GM13G36900 | 13 | Gm13 | + | View |
| GM13G36910 | 13 | Gm13 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G004950 | 5 | - | View | |
| MD10G022990 | 10 | + | View | |
| MD11G023210 | 11 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06918G00130 | scaffold06918 | + | View | |
| ME06918G00150 | scaffold06918 | + | View | |
| ME04851G00670 | scaffold04851 | - | View | |
| ME04851G00690 | scaffold04851 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G079350 | GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related | 4 | - | View |
| MT2G014990 | GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related | 2 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G37540 | PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926; | scaffold_1 | - | View |
| PT13G12170 | PACid=17339540;name=POPTR_0013s12740;alias=pt031181m,grail3.0142006701,Pt-RAB11.8; | scaffold_13 | - | View |
| PT13G12190 | PACid=17338863;name=POPTR_0013s12760;alias=pt031227m,estExt_Genewise1_v1.C_1420243; | scaffold_13 | - | View |
| PT19G11070 | PACid=17312362;name=POPTR_0019s12210;alias=pt010379m,estExt_Genewise1_v1.C_LG_XIX2288; | scaffold_19 | + | View |
| PT19G11090 | PACid=17330397;name=POPTR_0019s12230;alias=pt010347m,eugene3.00190842,Pt-RAB11.11; | scaffold_19 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC06G015030 | Tc06 | + | View | |
| TC06G015050 | Tc06 | + | View | |
| TC07G009100 | Tc07 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV19G02220 | name=GSVIVG01014250001; | chr19 | + | View |
| VV12G02380 | name=GSVIVG01020651001; | chr12 | + | View |
| VV12G02400 | name=GSVIVG01020653001; | chr12 | + | View |
| VV10G01640 | name=GSVIVG01021143001; | chr10 | - | View |
| VV10G01660 | name=GSVIVG01021145001; | chr10 | - | View |