Anchorpoints

Gene id
RC29646G00610
Organism
Ricinus communis

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
RC29900G0016029900-View
RC29900G0018029900-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL8G02380scaffold_8-View
AL7G24270scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18430RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E4-View
AT5G03520RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C5+View
AT5G03530Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00007G00910supercontig_7-View
CP00209G00020supercontig_209-View
CP00131G00800supercontig_131+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G22330Rac-like GTP-binding protein RAC2, Precursor (similar to)LG6-View
FV3G13420Ras-related protein Rab11B (similar to)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G4383006Gm06+View
GM12G1407012Gm12-View
GM12G1409012Gm12-View
GM12G3355012Gm12-View
GM12G3356012Gm12-View
GM13G3690013Gm13+View
GM13G3691013Gm13+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G0049505-View
MD10G02299010+View
MD11G02321011-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06918G00130scaffold06918+View
ME06918G00150scaffold06918+View
ME04851G00670scaffold04851-View
ME04851G00690scaffold04851-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G079350GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related4-View
MT2G014990GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related2-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G37540PACid=17314041;name=POPTR_0001s38300;alias=pt040125m,Pt-RAB11.4,estExt_fgenesh4_pg.C_LG_I2926;scaffold_1-View
PT13G12170PACid=17339540;name=POPTR_0013s12740;alias=pt031181m,grail3.0142006701,Pt-RAB11.8;scaffold_13-View
PT13G12190PACid=17338863;name=POPTR_0013s12760;alias=pt031227m,estExt_Genewise1_v1.C_1420243;scaffold_13-View
PT19G11070PACid=17312362;name=POPTR_0019s12210;alias=pt010379m,estExt_Genewise1_v1.C_LG_XIX2288;scaffold_19+View
PT19G11090PACid=17330397;name=POPTR_0019s12230;alias=pt010347m,eugene3.00190842,Pt-RAB11.11;scaffold_19+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC06G015030Tc06+View
TC06G015050Tc06+View
TC07G009100Tc07-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G02220name=GSVIVG01014250001;chr19+View
VV12G02380name=GSVIVG01020651001;chr12+View
VV12G02400name=GSVIVG01020653001;chr12+View
VV10G01640name=GSVIVG01021143001;chr10-View
VV10G01660name=GSVIVG01021145001;chr10-View


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Gene id
Species
Description
Chromosome
Strand