Anchorpoints

Gene id
PT15G00790
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT03G13680PACid=17329040;name=POPTR_0003s14630;alias=pt022995m;scaffold_3-View
PT12G02970PACid=17337098;name=POPTR_0012s03160;alias=pt015696m;scaffold_12+View
PT01G11130PACid=17305111;name=POPTR_0001s11320;alias=pt038021m;scaffold_1-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G24450scaffold_6-View
AL5G18480scaffold_5-View
AL8G18240scaffold_8-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G53570Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G49350.1); Has 4559 Blast hits to 4121 proteins in 234 species: Archae - 0; Bacteria - 21; Metazoa - 2510; Fungi - 811; Plants - 657; Viruses - 1; Other Eukaryotes - 559 (source: NCBI BLink).;Ypt/Rab-GAP domain of gyp1p superfamily protein5-View
AT5G24390Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G49350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Ypt/Rab-GAP domain of gyp1p superfamily protein5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G01350supercontig_3-View
CP00003G01360supercontig_3-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G35310GTPase-activating protein GYP7 (probable)LG7+View
FV0G41950GTPase-activating protein GYP7 (probable)scf0512956+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM06G1385006Gm06-View
GM04G4100004Gm04+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD07G0204707-View
MD01G0223901-View
MD13G01133013+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME07330G00060scaffold07330+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G092100GTPase activator-like protein of Rab-like small GTPases (AHRD V1 ***- Q9FIN3_ARATH); contains Interpro domain(s) IPR000195 RabGAP/TBC3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G27830source=BGI China;type=FgeneSH;Chr10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30068G0061030068-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC03G021470Tc03-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G05590name=GSVIVG01019648001;chr2-View
VV16G09540name=GSVIVG01038614001;chr16+View


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Gene id
Species
Description
Chromosome
Strand