Anchorpoints

Gene id
PT14G00060
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT07G14510PACid=17322686;name=POPTR_0007s15080;alias=pt025115m;scaffold_7-View
PT07G14520PACid=17303770;name=POPTR_0007s15090;alias=pt024855m,Pt-HAC1.4,fgenesh4_pm.C_LG_VII000516,HAC901;scaffold_7-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G17580scaffold_1+View
AL1G17590scaffold_1+View
AL1G17600scaffold_1+View
AL1G50810scaffold_1-View
AL2G28040scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G55970HAC4 is most likely to be an expressed pseudogene that lacks HAT function. there is a single nucleotide deletion in both the HAC4 genomic and cDNA sequences relative to its homologs. The resulting frameshift within the open reading frame causes a stop codon to occur within the predicted acetyltransferase catalytic domain.;histone acetyltransferase of the CBP family 41-View
AT1G16705p300/CBP acetyltransferase-related protein-related; BEST Arabidopsis thaliana protein match is: histone acetyltransferase of the CBP family 12 (TAIR:AT1G16710.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;p300/CBP acetyltransferase-related protein-related1+View
AT1G16710Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.;histone acetyltransferase of the CBP family 121+View
AT1G16720Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.;high chlorophyll fluorescence phenotype 1731+View
AT3G12980Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC5 acetylation of the H3 or H4 peptides, suggesting that HAC5 can acetylate any of several lysines present in the peptides. Di-acetylation of both lysines 9 and 14 on the H3 peptide significantly reduces the level of incorporated radioactive acetylation catalyzed by HAC5, indicating that HAC5 may acetylate either lysine 9 or lysine 14.;histone acetyltransferase of the CBP family 53+View
AT1G79000Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.;histone acetyltransferase of the CBP family 11-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM08G2428008Gm08-View
GM08G2429008Gm08-View
GM07G0023007Gm07+View
GM07G0024007Gm07+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30169G0004030169+View
RC30169G0005030169+View


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Gene id
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Description
Chromosome
Strand