Anchorpoints

Gene id
PT05G20030
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL1G38960scaffold_1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G43770RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G16680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;RING/FYVE/PHD zinc finger superfamily protein1+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00049G00440supercontig_49+View
CP00049G00460supercontig_49+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM10G3713010Gm10+View
GM10G3714010Gm10+View
GM20G3051020Gm20-View
GM04G3928004Gm04-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G0138001-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME06948G00290scaffold06948+View
ME06688G00370scaffold06688-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT1G099270Unknown Protein (AHRD V1); contains Interpro domain(s) IPR011011 Zinc finger, FYVE/PHD-type1+View
MT3G095800Unknown Protein (AHRD V1)3+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC27985G0010027985+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB05G0037845chr_5-View
SB08G0038908chr_8-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC00G072350Tc00-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G00380name=GSVIVG01001662001;chr18-View


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Gene id
Species
Description
Chromosome
Strand