Anchorpoints

Gene id
PT04G00480
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PT02G21160PACid=17340046;name=POPTR_0002s21540;alias=pt022304m;scaffold_2-View
PT02G21170PACid=17308166;name=POPTR_0002s21550;alias=pt020605m;scaffold_2-View
PT02G21190PACid=17317119;name=POPTR_0002s21570;alias=pt021725m,eugene3.12470001,EBP906;scaffold_2-View
PT11G01380PACid=17311133;name=POPTR_0011s01570;alias=pt014529m,estExt_Genewise1_v1.C_LG_XI1484,EBP902;scaffold_11-View
PT14G15330PACid=17333765;name=POPTR_0014s15520;alias=pt036231m;scaffold_14-View
PT14G15340PACid=17303157;name=POPTR_0014s15530;alias=pt035579m;scaffold_14-View
PT14G15360PACid=17328127;name=POPTR_0014s15550;alias=pt036733m;scaffold_14-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G20160scaffold_7+View
AL6G36190scaffold_6+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G04260Bromo-adjacent homology (BAH) domain-containing protein; FUNCTIONS IN: DNA binding, zinc ion binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G22140.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Bromo-adjacent homology (BAH) domain-containing protein4+View
AT4G22140EARLY BOLTING IN SHORT DAYS (EBS); FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: positive regulation of flower development, regulation of transcription, DNA-dependent, seed germination; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Bromo-adjacent homology (BAH) domain-containing protein (TAIR:AT4G04260.1); Has 1958 Blast hits to 1898 proteins in 183 species: Archae - 0; Bacteria - 0; Metazoa - 1059; Fungi - 271; Plants - 475; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).;PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00152G00530supercontig_152-View
CP00132G00070supercontig_132-View
CP00132G00080supercontig_132-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G01630Nucleosome-remodeling factor subunit NURF301 (NURF-215) (probable)LG3-View
FV3G01650BAH and coiled-coil domain-containing protein 1 (BAH domain-containing protein 2) (probable)LG3-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM14G0512014Gm14-View
GM02G4380002Gm02+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ0G427350chr0-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G0011705+View
MD10G02691010-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME05214G00260scaffold05214-View
ME05214G00270scaffold05214-View
ME05214G00280scaffold05214-View
ME05214G00290scaffold05214-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29842G0031029842+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC06G019810Tc06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV00G23960name=GSVIVG01004809001;chr10_random-View
VV12G11250name=GSVIVG01030486001;chr12-View
VV12G11260name=GSVIVG01030487001;chr12-View


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Gene id
Species
Description
Chromosome
Strand