Anchorpoints
- Gene id
- PT03G04870
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
PT01G17260 PACid=17332819;name=POPTR_0001s17450;alias=pt039131m,estExt_fgenesh4_pm.C_LG_I0447; scaffold_1 + View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL1G16320 scaffold_1 + View AL1G47760 scaffold_1 + View AL3G16590 scaffold_3 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G15470 Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species: Archae - 64; Bacteria - 7048; Metazoa - 15440; Fungi - 9730; Plants - 4355; Viruses - 0; Other Eukaryotes - 5016 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein 1 + View AT3G15610 Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein 3 - View AT1G52730 Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41491 Blast hits to 21864 proteins in 790 species: Archae - 74; Bacteria - 7325; Metazoa - 14827; Fungi - 9797; Plants - 4470; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein 1 + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00010G01930 supercontig_10 - View CP00010G01950 supercontig_10 - View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV1G06310 Serine-threonine kinase receptor-associated protein (similar to) LG1 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM17G12770 17 Gm17 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME02853G00070 scaffold02853 + View ME04151G00800 scaffold04151 + View
Oryza sativa ssp. japonica
Gene id
Description
Chromosome
Strand
Multiplicon
OS02G11060 WD domain, G%2Dbeta repeat domain containing protein, expressed 2 + View
Oryza sativa ssp. indica
Gene id
Description
Chromosome
Strand
Multiplicon
OSINDICA_02G10650 source=BGI China;type=FgeneSH; Chr02 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29841G00450 29841 - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC09G010660 Tc09 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV11G05930 name=GSVIVG01015473001; chr11 - View VV09G06140 name=GSVIVG01017219001; chr9 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G17260 | PACid=17332819;name=POPTR_0001s17450;alias=pt039131m,estExt_fgenesh4_pm.C_LG_I0447; | scaffold_1 | + | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL1G16320 | scaffold_1 | + | View | |
| AL1G47760 | scaffold_1 | + | View | |
| AL3G16590 | scaffold_3 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G15470 | Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species: Archae - 64; Bacteria - 7048; Metazoa - 15440; Fungi - 9730; Plants - 4355; Viruses - 0; Other Eukaryotes - 5016 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein | 1 | + | View |
| AT3G15610 | Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species: Archae - 76; Bacteria - 7357; Metazoa - 15603; Fungi - 10314; Plants - 4879; Viruses - 0; Other Eukaryotes - 5477 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein | 3 | - | View |
| AT1G52730 | Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G15610.1); Has 41491 Blast hits to 21864 proteins in 790 species: Archae - 74; Bacteria - 7325; Metazoa - 14827; Fungi - 9797; Plants - 4470; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink).;Transducin/WD40 repeat-like superfamily protein | 1 | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00010G01930 | supercontig_10 | - | View | |
| CP00010G01950 | supercontig_10 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G06310 | Serine-threonine kinase receptor-associated protein (similar to) | LG1 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM17G12770 | 17 | Gm17 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME02853G00070 | scaffold02853 | + | View | |
| ME04151G00800 | scaffold04151 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS02G11060 | WD domain, G%2Dbeta repeat domain containing protein, expressed | 2 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G10650 | source=BGI China;type=FgeneSH; | Chr02 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29841G00450 | 29841 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC09G010660 | Tc09 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV11G05930 | name=GSVIVG01015473001; | chr11 | - | View |
| VV09G06140 | name=GSVIVG01017219001; | chr9 | - | View |