Anchorpoints
- Gene id
- PT02G01900
- Organism
- Populus trichocarpa
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
PT05G11090 PACid=17333858;name=POPTR_0005s11280;alias=pt032285m; scaffold_5 + View PT05G25210 PACid=17318968;name=POPTR_0005s26350;alias=pt032287m,fgenesh4_pm.C_LG_V000661; scaffold_5 - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL2G24780 scaffold_2 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G75850 VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).;VPS35 homolog B 1 - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CP00006G02830 supercontig_6 - View CP00026G03030 supercontig_26 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV1G13260 Vacuolar protein sorting-associated protein 35 (probable) LG1 + View FV2G38230 Vacuolar protein sorting-associated protein 35 (probable) LG2 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM11G08390 11 Gm11 - View GM14G40270 14 Gm14 + View GM01G36870 01 Gm01 + View GM17G37870 17 Gm17 - View
Lotus japonicus
Gene id
Description
Chromosome
Strand
Multiplicon
LJ2G022400 chr2 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD15G017880 15 + View MD15G017890 15 + View MD12G014610 12 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME06512G01380 scaffold06512 - View ME02943G00400 scaffold02943 - View ME07520G02860 scaffold07520 - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT1G025610 Vacuolar protein sorting 35 (AHRD V1 ***- B6U2K5_MAIZE); contains Interpro domain(s) IPR005378 Vacuolar protein sorting-associated protein 35 1 - View MT5G022610 Vacuolar protein sorting 35 (AHRD V1 ***- B6U2K5_MAIZE); contains Interpro domain(s) IPR005378 Vacuolar protein sorting-associated protein 35 5 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC28962G00270 28962 + View RC30170G05740 30170 - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC08G003910 Tc08 - View TC01G001330 Tc01 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV18G10950 name=GSVIVG01009948001; chr18 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT05G11090 | PACid=17333858;name=POPTR_0005s11280;alias=pt032285m; | scaffold_5 | + | View |
| PT05G25210 | PACid=17318968;name=POPTR_0005s26350;alias=pt032287m,fgenesh4_pm.C_LG_V000661; | scaffold_5 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL2G24780 | scaffold_2 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G75850 | VPS35 homolog B (VPS35B); CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378); BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1); Has 618 Blast hits to 508 proteins in 209 species: Archae - 0; Bacteria - 1; Metazoa - 191; Fungi - 219; Plants - 72; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).;VPS35 homolog B | 1 | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00006G02830 | supercontig_6 | - | View | |
| CP00026G03030 | supercontig_26 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G13260 | Vacuolar protein sorting-associated protein 35 (probable) | LG1 | + | View |
| FV2G38230 | Vacuolar protein sorting-associated protein 35 (probable) | LG2 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM11G08390 | 11 | Gm11 | - | View |
| GM14G40270 | 14 | Gm14 | + | View |
| GM01G36870 | 01 | Gm01 | + | View |
| GM17G37870 | 17 | Gm17 | - | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ2G022400 | chr2 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD15G017880 | 15 | + | View | |
| MD15G017890 | 15 | + | View | |
| MD12G014610 | 12 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME06512G01380 | scaffold06512 | - | View | |
| ME02943G00400 | scaffold02943 | - | View | |
| ME07520G02860 | scaffold07520 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT1G025610 | Vacuolar protein sorting 35 (AHRD V1 ***- B6U2K5_MAIZE); contains Interpro domain(s) IPR005378 Vacuolar protein sorting-associated protein 35 | 1 | - | View |
| MT5G022610 | Vacuolar protein sorting 35 (AHRD V1 ***- B6U2K5_MAIZE); contains Interpro domain(s) IPR005378 Vacuolar protein sorting-associated protein 35 | 5 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC28962G00270 | 28962 | + | View | |
| RC30170G05740 | 30170 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC08G003910 | Tc08 | - | View | |
| TC01G001330 | Tc01 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G10950 | name=GSVIVG01009948001; | chr18 | - | View |