Anchorpoints

Gene id
PT01G36780
Organism
Populus trichocarpa

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G13630scaffold_3-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G13170Encodes AtSPO11-1, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions in DNA replication. AtSPO11-1 accumulates in foci in early G2. At 1 h post-S phase, no foci are observed, but by 3 h a majority (80%) of meiocytes at this time point contain >50 foci. However, by 5 h, AtSPO11-1 foci are no longer detectable. This suggests that the protein undergoes a rapid cycle of accumulation and disappearance in meiocytes over a period of between 1 and 5 h post-S phase.;Spo11/DNA topoisomerase VI, subunit A protein3-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00012G01620supercontig_12+View
CP00012G01630supercontig_12+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G42610Meiotic recombination protein SPO11-1 (AtSPO11-1) (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G4692002Gm02-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD11G01632011+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03332G00650scaffold03332-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G095040Meiotic recombination protein SPO11-1 (AHRD V1 ***- Q9M4A2); contains Interpro domain(s) IPR002815 Spo11/DNA topoisomerase VI, subunit A5+View
MT5G095090Meiotic recombination protein SPO11 (AHRD V1 ***- B6TWI5_MAIZE); contains Interpro domain(s) IPR002815 Spo11/DNA topoisomerase VI, subunit A5+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29629G0041029629+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC07G001390Tc07+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV19G05430name=GSVIVG01014659001;chr19-View


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Gene id
Species
Description
Chromosome
Strand