Anchorpoints

Gene id
OSINDICA_06G07700
Organism
Oryza sativa ssp. indica

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G53590source=BGI China;type=FgeneSH;Chr02+View
OSINDICA_02G53610source=BGI China;type=FgeneSH;Chr02+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G09540scaffold_7-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G31985Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT3G02190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Ribosomal protein L39 family protein4+View
AT2G25210Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT4G31985.1); Has 908 Blast hits to 908 proteins in 288 species: Archae - 195; Bacteria - 0; Metazoa - 389; Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).;Ribosomal protein L39 family protein2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G47500Bd1+View
BD3G54170Bd3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV2G5203060S ribosomal protein L39-1 (similar to)LG2-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM15G2465015Gm15-View
GM04G0670004Gm04+View
GM06G0679006Gm06+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME00847G02040scaffold00847-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G10631060S ribosomal protein L39 (AHRD V1 ***- B6SP00_MAIZE); contains Interpro domain(s) IPR000077 Ribosomal protein L39e3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G0832060S ribosomal protein L39, putative, expressed6-View
OS02G5537060S ribosomal protein L39, putative, expressed2+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G02070PACid=17549344;name=POPTR_0018s02260;alias=pta000334m,estExt_Genewise1_v1.C_LG_XVIII1780;scaffold_18-View
PT18G02080PACid=17308262;name=POPTR_0018s02270;alias=pt008941m;scaffold_18-View
PT06G25960PACid=17549686;name=POPTR_0006s27670;alias=pta000354m,grail3.0013044901;scaffold_6-View
PT06G25980PACid=17319893;name=POPTR_0006s27690;alias=pt019323m;scaffold_6-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G0360304chr_4+View
SB10G00551010chr_10-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC09G001700Tc09+View
TC09G003220Tc09+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G00160name=GSVIVG01001053001;chr11-View
VV11G00180name=GSVIVG01001055001;chr11-View
VV04G12650name=GSVIVG01035912001;chr4+View
VV04G12660name=GSVIVG01035913001;chr4-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G2587060S ribosomal protein L39 4-View
ZM05G4320060S ribosomal protein L39 5+View
ZM09G0291060S ribosomal protein L39 9+View


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Gene id
Species
Description
Chromosome
Strand