Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G15370scaffold_5-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G59840Ras-related small GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A (TAIR:AT3G46060.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;Ras-related small GTP-binding family protein5-View
AT3G46830RAB GTPase homolog A2C (RABA2c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28770 Blast hits to 28717 proteins in 774 species: Archae - 26; Bacteria - 141; Metazoa - 14934; Fungi - 4337; Plants - 3364; Viruses - 20; Other Eukaryotes - 5948 (source: NCBI BLink).;RAB GTPase homolog A2C3-View
AT5G59150RAB GTPase homolog A2D (RABA2D); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2C (TAIR:AT3G46830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RAB GTPase homolog A2D5+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G54950GTPase activity (Blast2GO)Bd2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00081G00600supercontig_81+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G28410Ras-related protein Rab2BV (putative)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G0376018Gm18+View
GM02G4194002Gm02-View
GM12G0628012Gm12+View
GM14G0704014Gm14+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD01G0129601-View
MD11G00728011+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03150G00820scaffold03150+View
ME08265G02610scaffold08265-View
ME06908G00180scaffold06908+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G59670source=BGI China;type=FgeneSH;Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G19320PACid=17302204;name=POPTR_0010s20460;alias=pt012698m;scaffold_10+View
PT08G05970PACid=17305206;name=POPTR_0008s06160;alias=pt027804m,fgenesh4_pg.C_LG_VIII000519,Pt-RAB11.9;scaffold_8-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29751G0070029751+View
RC30143G0048030143-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G0398503chr_3-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC09G030970Tc09+View
TC10G002370Tc10+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G04580name=GSVIVG01016457001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G31850LOC100280532 8-View


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Gene id
Species
Description
Chromosome
Strand