Anchorpoints

Gene id
ME11069G00560
Organism
Manihot esculenta

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
ME03002G00050scaffold03002-View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL6G02740scaffold_6+View
AL6G02750scaffold_6-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G09900RAB GTPase homolog E1E (RABE1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8C (TAIR:AT5G03520.1); Has 29798 Blast hits to 29728 proteins in 826 species: Archae - 21; Bacteria - 199; Metazoa - 15588; Fungi - 4257; Plants - 3488; Viruses - 20; Other Eukaryotes - 6225 (source: NCBI BLink).;RAB GTPase homolog E1E3+View
AT3G09910RAB GTPase homolog C2B (RABC2b); FUNCTIONS IN: GTP binding, transcription factor binding, ATP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: sepal, root, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras (InterPro:IPR013753), Small GTP-binding protein (InterPro:IPR005225), Ras GTPase (InterPro:IPR001806), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase (InterPro:IPR020851), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078), Rab18 (InterPro:IPR015598); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog C2A (TAIR:AT5G03530.1); Has 29365 Blast hits to 29334 proteins in 746 species: Archae - 15; Bacteria - 117; Metazoa - 15214; Fungi - 4279; Plants - 3567; Viruses - 20; Other Eukaryotes - 6153 (source: NCBI BLink).;RAB GTPase homolog C2B3-View
AT5G03520RAB GTPase homolog 8C (RAB8C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1E (TAIR:AT3G09900.1); Has 29771 Blast hits to 29709 proteins in 824 species: Archae - 21; Bacteria - 191; Metazoa - 15611; Fungi - 4242; Plants - 3476; Viruses - 20; Other Eukaryotes - 6210 (source: NCBI BLink).;RAB GTPase homolog 8C5+View
AT5G03530Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.;RAB GTPase homolog C2A5-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00092G00900supercontig_92-View
CP00053G01640supercontig_53-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G50030GTP-binding protein yptV3 (similar to)LG6-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM13G2097013Gm13-View
GM03G3433003Gm03-View
GM10G0678010Gm10-View
GM19G3702019Gm19-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G050070chr1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G12130PACid=17310687;name=POPTR_0006s12320;alias=pt019399m;scaffold_6+View
PT16G10260PACid=17345643;name=POPTR_0016s10830;alias=pt003513m,Pt-ALPHA.3,estExt_fgenesh4_pm.C_LG_XVI0347;scaffold_16-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30078G0041030078+View
RC30078G0042030078+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC10G006980Tc10-View
TC00G055990Tc00-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G02380name=GSVIVG01016169001;chr13-View
VV13G02460name=GSVIVG01016180001;chr13-View
VV08G10680name=GSVIVG01033680001;chr8-View
VV08G10690name=GSVIVG01033681001;chr8+View


Download

Gene id
Species
Description
Chromosome
Strand