Anchorpoints

Gene id
ME06656G00560
Organism
Manihot esculenta

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
ME06871G01140scaffold06871-View
ME06871G01150scaffold06871+View
ME04043G01520scaffold04043-View
ME04043G01530scaffold04043+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G17190scaffold_2-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G68910Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.;WPP domain-interacting protein 21-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G02580supercontig_14-View
CP00014G02590supercontig_14-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G03140WPP domain-interacting tail-anchored protein 2 (probable)scf0513158-View
FV0G03200Probable sodium-coupled neutral amino acid transporter 6scf0513158+View
FV6G41700Probable sodium-coupled neutral amino acid transporter 6LG6-View
FV6G41710WPP domain-interacting tail-anchored protein 1 (probable)LG6+View
FV6G41720Putative sodium-coupled neutral amino acid transporter 10 (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G1388002Gm02+View
GM01G0942001Gm01+View
GM19G0499019Gm19-View
GM19G0500019Gm19-View
GM19G0503019Gm19+View
GM08G2819008Gm08-View
GM18G5122018Gm18-View
GM18G5123018Gm18+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ2G014120chr2+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD13G00354013-View
MD17G00577017-View
MD17G00578017+View
MD16G00239016-View
MD16G00243016+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G065630Amino acid transporter (AHRD V1 ***- B9N7P5_POPTR); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane8+View
MT8G065670Sodium-coupled neutral amino acid transporter 2 (AHRD V1 ***- Q5SPB1); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane8+View
MT8G065940Sodium-coupled neutral amino acid transporter 2 (AHRD V1 ***- Q5SPB1); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane8-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G47720source=BGI China;type=FgeneSH;Chr02-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G14140PACid=17342347;name=POPTR_0017s14520;alias=pt028885m;scaffold_17-View
PT17G14150PACid=17316766;name=POPTR_0017s14530;alias=pt029138m,eugene3.01230009;scaffold_17+View
PT10G13450PACid=17334659;name=POPTR_0010s14590;alias=pt011390m;scaffold_10-View
PT10G13500PACid=17335682;name=POPTR_0010s14640;alias=pt013489m;scaffold_10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30138G0051030138-View
RC30138G0057030138+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB10G01029010chr_10+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G02360name=GSVIVG01010127001;chr1+View
VV14G15810name=GSVIVG01036512001;chr14-View
VV14G15820name=GSVIVG01036513001;chr14+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G07670hypothetical protein LOC100273225 9+View
ZM05G391605-View


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Gene id
Species
Description
Chromosome
Strand