Anchorpoints
- Gene id
- ME04355G00230
- Organism
- Manihot esculenta
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
MECG00030 psbA;photosystem II protein D1;protein_id=ABV66134.1; chloroplast - View MECG00050 matK;maturase K;protein_id=ABV66135.1; chloroplast - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL2G10380 scaffold_2 + View AL2G10390 scaffold_2 + View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
ATCG00020 Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core;photosystem II reaction center protein A chloroplast - View ATCG00040 Encodes a maturase located in the trnK intron in the chloroplast genome.;maturase K chloroplast - View
Brachypodium distachyon
Gene id
Description
Chromosome
Strand
Multiplicon
BDCG00020 psbA;PSII 32kDa protein;protein_id=ACF08621.1; chloroplast - View BDCG00040 matK;maturase;protein_id=ACF08622.1; chloroplast - View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CPCG00030 psbA;photosystem II protein D1;protein_id=ABY86762.1; chloroplast - View CPCG00050 matK;maturase;protein_id=ABY86763.1; chloroplast - View
Oryza sativa ssp. japonica
Gene id
Description
Chromosome
Strand
Multiplicon
OSCG00010 psbA;PSII 32kDa protein;protein_id=CAA34007.1; chloroplast - View OSCG00030 protein_id=CAA34008.1; chloroplast - View OS10G21192 photosystem Q, putative 10 - View OS10G21194 maturase K, putative 10 - View
Ostreococcus tauri
Gene id
Description
Chromosome
Strand
Multiplicon
OTCG00460 PsbA_1;protein_id=CAL36355.1; chloroplast - View OTCG00880 PsbA_2;protein_id=CAL36386.1; chloroplast + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PTCG00030 psbA;photosystem II D1-reaction-center protein;protein_id=ABO36683.1; chloroplast - View PTCG00050 matK;maturase K;protein_id=ABO36684.1; chloroplast - View
Sorghum bicolor
Gene id
Description
Chromosome
Strand
Multiplicon
SBCG00040 psbA;photosystem II protein D1;protein_id=ABK79476.1; chloroplast - View SBCG00060 matK;maturase K;protein_id=ABK79477.1; chloroplast - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TCCG00030 psbA;photosystem II protein D1;protein_id=ADO64870.1; chloroplast - View TCCG00050 matK;maturase K;protein_id=ADO64871.1; chloroplast - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VVCG00020 psbA;photosystem II protein D1;protein_id=ABE47514.1; chloroplast - View VVCG00040 matK;maturase K;protein_id=ABE47515.1; chloroplast - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MECG00030 | psbA;photosystem II protein D1;protein_id=ABV66134.1; | chloroplast | - | View |
| MECG00050 | matK;maturase K;protein_id=ABV66135.1; | chloroplast | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL2G10380 | scaffold_2 | + | View | |
| AL2G10390 | scaffold_2 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATCG00020 | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core;photosystem II reaction center protein A | chloroplast | - | View |
| ATCG00040 | Encodes a maturase located in the trnK intron in the chloroplast genome.;maturase K | chloroplast | - | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BDCG00020 | psbA;PSII 32kDa protein;protein_id=ACF08621.1; | chloroplast | - | View |
| BDCG00040 | matK;maturase;protein_id=ACF08622.1; | chloroplast | - | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CPCG00030 | psbA;photosystem II protein D1;protein_id=ABY86762.1; | chloroplast | - | View |
| CPCG00050 | matK;maturase;protein_id=ABY86763.1; | chloroplast | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSCG00010 | psbA;PSII 32kDa protein;protein_id=CAA34007.1; | chloroplast | - | View |
| OSCG00030 | protein_id=CAA34008.1; | chloroplast | - | View |
| OS10G21192 | photosystem Q, putative | 10 | - | View |
| OS10G21194 | maturase K, putative | 10 | - | View |
Ostreococcus tauri
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OTCG00460 | PsbA_1;protein_id=CAL36355.1; | chloroplast | - | View |
| OTCG00880 | PsbA_2;protein_id=CAL36386.1; | chloroplast | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PTCG00030 | psbA;photosystem II D1-reaction-center protein;protein_id=ABO36683.1; | chloroplast | - | View |
| PTCG00050 | matK;maturase K;protein_id=ABO36684.1; | chloroplast | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SBCG00040 | psbA;photosystem II protein D1;protein_id=ABK79476.1; | chloroplast | - | View |
| SBCG00060 | matK;maturase K;protein_id=ABK79477.1; | chloroplast | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TCCG00030 | psbA;photosystem II protein D1;protein_id=ADO64870.1; | chloroplast | - | View |
| TCCG00050 | matK;maturase K;protein_id=ADO64871.1; | chloroplast | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VVCG00020 | psbA;photosystem II protein D1;protein_id=ABE47514.1; | chloroplast | - | View |
| VVCG00040 | matK;maturase K;protein_id=ABE47515.1; | chloroplast | - | View |