Anchorpoints

Gene id
ME04355G00220
Organism
Manihot esculenta

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MECG00150atpA;ATP synthase CF1 alpha subunit;protein_id=ABV66139.1;chloroplast-View
MECG00170atpH;ATP synthase CF0 subunit III;protein_id=ABV66141.1;chloroplast-View
MECG00180atpI;ATP synthase CF0 subunit IV;protein_id=ABV66142.1;chloroplast-View
MECG00190rps2;ribosomal protein S2;protein_id=ABV66143.1;chloroplast-View
MECG00680psaJ;photosystem I subunit IX;protein_id=ABV66174.1;chloroplast+View
MECG00690rpl33;ribosomal protein L33;protein_id=ABV66175.1;chloroplast+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
ATCG00120Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.;ATP synthase subunit alphachloroplast-View
ATCG00140ATPase III subunit;ATP synthase subunit C family proteinchloroplast-View
ATCG00150Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.;ATPase, F0 complex, subunit A proteinchloroplast-View
ATCG00160Chloroplast ribosomal protein S2;ribosomal protein S2chloroplast-View
ATCG00630Encodes subunit J of photosystem I.;PSAJchloroplast+View
ATCG00640encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex;ribosomal protein L33chloroplast+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CPCG00130atpA;ATPase alpha subunit;protein_id=ABY86767.1;chloroplast-View
CPCG00150atpH;ATP synthase CF0 C chain;protein_id=ABY86769.1;chloroplast-View
CPCG00160atpI;ATP synthase CF0 A chain;protein_id=ABY86770.1;chloroplast-View
CPCG00170rps2;ribosomal protein S2;protein_id=ABY86771.1;chloroplast-View
CPCG00640psaJ;photosystem I subunit IX;protein_id=ABY86802.1;chloroplast+View
CPCG00650rpl33;ribosomal protein L33;protein_id=ABY86803.1;chloroplast+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GMCG00390rps2;ribosomal protein S2;protein_id=ABC25126.1;chloroplast+View
GMCG00400atpI;ATP synthase CF0 subunit IV;protein_id=ABC25127.1;chloroplast+View
GMCG00410atpH;ATP synthase CF0 subunit III;protein_id=ABC25128.1;chloroplast+View
GMCG00430atpA;ATP synthase CF1 alpha subunit;protein_id=ABC25130.1;chloroplast+View
GMCG00630psaJ;photosystem I subunit IX;protein_id=ABC25144.1;chloroplast+View
GMCG00640rpl33;ribosomal protein L33;protein_id=ABC25145.1;chloroplast+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJCG00380rps2;ribosomal protein S2;protein_id=BAB33197.1;chloroplast+View
LJCG00390atpI;ATPase a subunit;protein_id=BAB33198.1;chloroplast+View
LJCG00400atpH;ATPase III subunit;protein_id=BAB33199.1;chloroplast+View
LJCG00420atpA;ATPase alpha subunit;protein_id=BAB33201.1;chloroplast+View
LJCG00630psaJ;PSI J protein;protein_id=BAB33216.1;chloroplast+View
LJCG00640rpl33;ribosomal protein L33;protein_id=BAB33217.1;chloroplast+View

Micromonas sp. RCC299

Gene id Description Chromosome Strand Multiplicon
MRCC299_CG00320ATP synthase CF1 alpha chain;protein_id=ACO55544.1;chloroplast-View
MRCC299_CG00340ATP synthase CF0 subunit C;protein_id=ACO55546.1;chloroplast-View
MRCC299_CG00350ATP synthase CF0 subunit A;protein_id=ACO55547.1;chloroplast-View
MRCC299_CG00600small subunit ribosomal protein S2;protein_id=ACO55562.1;chloroplast-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G051110ATP synthase subunit a chloroplastic (AHRD V1 *-*- B8R490_TRISU); contains Interpro domain(s) IPR005706 Ribosomal protein S2, bacterial-type4-View
MT4G05135030S ribosomal protein S18, chloroplastic (AHRD V1 *-*- P49169); contains Interpro domain(s) IPR001648 Ribosomal protein S184+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_CG00110rps2;ribosomal protein S2;protein_id=AAS46049.1;chloroplast+View
OSINDICA_CG00120atpI;ATP synthase CF0 A chain;protein_id=AAS46050.1;chloroplast+View
OSINDICA_CG00130atpH;ATP synthase CF0 C chain;protein_id=AAS46051.1;chloroplast+View
OSINDICA_CG00140atpA;ATP synthase CF1 alpha chain;protein_id=AAS46052.1;chloroplast+View
OSINDICA_CG00300rpl33;ribosomal protein L33;protein_id=AAS46068.1;chloroplast+View

Ostreococcus tauri

Gene id Description Chromosome Strand Multiplicon
OTCG00400Rps2;protein_id=CAL36354.1;chloroplast+View
OTCG00640AtpI;protein_id=CAL36369.1;chloroplast+View
OTCG00650AtpH;protein_id=CAL36370.1;chloroplast+View
OTCG00670AtpA;protein_id=CAL36372.1;chloroplast+View

Physcomitrella patens

Gene id Description Chromosome Strand Multiplicon
PPCG00770atpA;ATP synthase alpha subunit;protein_id=BAC85066.1;chloroplast-View
PPCG00790atpH;ATP synthase III subunit;protein_id=BAC85068.1;chloroplast-View
PPCG00800atpI;ATP synthase IV subunit;protein_id=BAC85069.1;chloroplast-View
PPCG00810rps2;ribosomal protein S2;protein_id=BAC85070.1;chloroplast-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PTCG00120atpA;ATP synthase CF1 alpha subunit;protein_id=ABO36687.1;chloroplast-View
PTCG00140atpH;ATP synthase CF0 subunit III;protein_id=ABO36689.1;chloroplast-View
PTCG00150atpI;ATP synthase CF0 A chain subunit IV;protein_id=ABO36690.1;chloroplast-View
PTCG00160rps2;30S ribosomal protein S2;protein_id=ABO36691.1;chloroplast-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29923G0002029923+View
RC29923G0003029923+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC04G003640Tc04+View
TC04G003950Tc04+View
TCCG00130atpA;ATP synthase CF1 alpha subunit;protein_id=ADO64875.1;chloroplast-View
TCCG00150atpH;ATP synthase CF0 subunit III;protein_id=ADO64877.1;chloroplast-View
TCCG00160atpI;ATP synthase CF0 subunit IV;protein_id=ADO64878.1;chloroplast-View
TCCG00170rps2;ribosomal protein S2;protein_id=ADO64879.1;chloroplast-View
TCCG00640psaJ;photosystem I subunit IX;protein_id=ADO64910.1;chloroplast+View
TCCG00650rpl33;ribosomal protein L33;protein_id=ADO64911.1;chloroplast+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VVCG00140atpA;ATP synthase CF1 alpha subunit;protein_id=ABE47519.1;chloroplast-View
VVCG00160atpH;ATP synthase CF0 subunit III;protein_id=ABE47521.1;chloroplast-View
VVCG00170atpI;ATP synthase CF0 subunit IV;protein_id=ABE47522.1;chloroplast-View
VVCG00180rps2;ribosomal protein S2;protein_id=ABE47523.1;chloroplast-View
VVCG00670psaJ;photosystem I subunit IX;protein_id=ABE47554.1;chloroplast+View
VVCG00680rpl33;ribosomal protein L33;protein_id=ABE47555.1;chloroplast+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZMCG0008030S ribosomal protein S2;30S ribosomal protein S2, chloroplastic chloroplast+View
ZMCG00090ATPase IV subunit;ATP synthase subunit a, chloroplastic (F-ATPase subunit IV)(ATP synthase F0 sector subunit a)chloroplast+View
ZMCG0018050S ribosomal protein L33, chloroplastic chloroplast+View


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Gene id
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Description
Chromosome
Strand