Anchorpoints
- Gene id
- ME04355G00220
- Organism
- Manihot esculenta
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
MECG00150 atpA;ATP synthase CF1 alpha subunit;protein_id=ABV66139.1; chloroplast - View MECG00170 atpH;ATP synthase CF0 subunit III;protein_id=ABV66141.1; chloroplast - View MECG00180 atpI;ATP synthase CF0 subunit IV;protein_id=ABV66142.1; chloroplast - View MECG00190 rps2;ribosomal protein S2;protein_id=ABV66143.1; chloroplast - View MECG00680 psaJ;photosystem I subunit IX;protein_id=ABV66174.1; chloroplast + View MECG00690 rpl33;ribosomal protein L33;protein_id=ABV66175.1; chloroplast + View
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
ATCG00120 Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.;ATP synthase subunit alpha chloroplast - View ATCG00140 ATPase III subunit;ATP synthase subunit C family protein chloroplast - View ATCG00150 Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.;ATPase, F0 complex, subunit A protein chloroplast - View ATCG00160 Chloroplast ribosomal protein S2;ribosomal protein S2 chloroplast - View ATCG00630 Encodes subunit J of photosystem I.;PSAJ chloroplast + View ATCG00640 encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex;ribosomal protein L33 chloroplast + View
Carica papaya
Gene id
Description
Chromosome
Strand
Multiplicon
CPCG00130 atpA;ATPase alpha subunit;protein_id=ABY86767.1; chloroplast - View CPCG00150 atpH;ATP synthase CF0 C chain;protein_id=ABY86769.1; chloroplast - View CPCG00160 atpI;ATP synthase CF0 A chain;protein_id=ABY86770.1; chloroplast - View CPCG00170 rps2;ribosomal protein S2;protein_id=ABY86771.1; chloroplast - View CPCG00640 psaJ;photosystem I subunit IX;protein_id=ABY86802.1; chloroplast + View CPCG00650 rpl33;ribosomal protein L33;protein_id=ABY86803.1; chloroplast + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GMCG00390 rps2;ribosomal protein S2;protein_id=ABC25126.1; chloroplast + View GMCG00400 atpI;ATP synthase CF0 subunit IV;protein_id=ABC25127.1; chloroplast + View GMCG00410 atpH;ATP synthase CF0 subunit III;protein_id=ABC25128.1; chloroplast + View GMCG00430 atpA;ATP synthase CF1 alpha subunit;protein_id=ABC25130.1; chloroplast + View GMCG00630 psaJ;photosystem I subunit IX;protein_id=ABC25144.1; chloroplast + View GMCG00640 rpl33;ribosomal protein L33;protein_id=ABC25145.1; chloroplast + View
Lotus japonicus
Gene id
Description
Chromosome
Strand
Multiplicon
LJCG00380 rps2;ribosomal protein S2;protein_id=BAB33197.1; chloroplast + View LJCG00390 atpI;ATPase a subunit;protein_id=BAB33198.1; chloroplast + View LJCG00400 atpH;ATPase III subunit;protein_id=BAB33199.1; chloroplast + View LJCG00420 atpA;ATPase alpha subunit;protein_id=BAB33201.1; chloroplast + View LJCG00630 psaJ;PSI J protein;protein_id=BAB33216.1; chloroplast + View LJCG00640 rpl33;ribosomal protein L33;protein_id=BAB33217.1; chloroplast + View
Micromonas sp. RCC299
Gene id
Description
Chromosome
Strand
Multiplicon
MRCC299_CG00320 ATP synthase CF1 alpha chain;protein_id=ACO55544.1; chloroplast - View MRCC299_CG00340 ATP synthase CF0 subunit C;protein_id=ACO55546.1; chloroplast - View MRCC299_CG00350 ATP synthase CF0 subunit A;protein_id=ACO55547.1; chloroplast - View MRCC299_CG00600 small subunit ribosomal protein S2;protein_id=ACO55562.1; chloroplast - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT4G051110 ATP synthase subunit a chloroplastic (AHRD V1 *-*- B8R490_TRISU); contains Interpro domain(s) IPR005706 Ribosomal protein S2, bacterial-type 4 - View MT4G051350 30S ribosomal protein S18, chloroplastic (AHRD V1 *-*- P49169); contains Interpro domain(s) IPR001648 Ribosomal protein S18 4 + View
Oryza sativa ssp. indica
Gene id
Description
Chromosome
Strand
Multiplicon
OSINDICA_CG00110 rps2;ribosomal protein S2;protein_id=AAS46049.1; chloroplast + View OSINDICA_CG00120 atpI;ATP synthase CF0 A chain;protein_id=AAS46050.1; chloroplast + View OSINDICA_CG00130 atpH;ATP synthase CF0 C chain;protein_id=AAS46051.1; chloroplast + View OSINDICA_CG00140 atpA;ATP synthase CF1 alpha chain;protein_id=AAS46052.1; chloroplast + View OSINDICA_CG00300 rpl33;ribosomal protein L33;protein_id=AAS46068.1; chloroplast + View
Ostreococcus tauri
Gene id
Description
Chromosome
Strand
Multiplicon
OTCG00400 Rps2;protein_id=CAL36354.1; chloroplast + View OTCG00640 AtpI;protein_id=CAL36369.1; chloroplast + View OTCG00650 AtpH;protein_id=CAL36370.1; chloroplast + View OTCG00670 AtpA;protein_id=CAL36372.1; chloroplast + View
Physcomitrella patens
Gene id
Description
Chromosome
Strand
Multiplicon
PPCG00770 atpA;ATP synthase alpha subunit;protein_id=BAC85066.1; chloroplast - View PPCG00790 atpH;ATP synthase III subunit;protein_id=BAC85068.1; chloroplast - View PPCG00800 atpI;ATP synthase IV subunit;protein_id=BAC85069.1; chloroplast - View PPCG00810 rps2;ribosomal protein S2;protein_id=BAC85070.1; chloroplast - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PTCG00120 atpA;ATP synthase CF1 alpha subunit;protein_id=ABO36687.1; chloroplast - View PTCG00140 atpH;ATP synthase CF0 subunit III;protein_id=ABO36689.1; chloroplast - View PTCG00150 atpI;ATP synthase CF0 A chain subunit IV;protein_id=ABO36690.1; chloroplast - View PTCG00160 rps2;30S ribosomal protein S2;protein_id=ABO36691.1; chloroplast - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29923G00020 29923 + View RC29923G00030 29923 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC04G003640 Tc04 + View TC04G003950 Tc04 + View TCCG00130 atpA;ATP synthase CF1 alpha subunit;protein_id=ADO64875.1; chloroplast - View TCCG00150 atpH;ATP synthase CF0 subunit III;protein_id=ADO64877.1; chloroplast - View TCCG00160 atpI;ATP synthase CF0 subunit IV;protein_id=ADO64878.1; chloroplast - View TCCG00170 rps2;ribosomal protein S2;protein_id=ADO64879.1; chloroplast - View TCCG00640 psaJ;photosystem I subunit IX;protein_id=ADO64910.1; chloroplast + View TCCG00650 rpl33;ribosomal protein L33;protein_id=ADO64911.1; chloroplast + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VVCG00140 atpA;ATP synthase CF1 alpha subunit;protein_id=ABE47519.1; chloroplast - View VVCG00160 atpH;ATP synthase CF0 subunit III;protein_id=ABE47521.1; chloroplast - View VVCG00170 atpI;ATP synthase CF0 subunit IV;protein_id=ABE47522.1; chloroplast - View VVCG00180 rps2;ribosomal protein S2;protein_id=ABE47523.1; chloroplast - View VVCG00670 psaJ;photosystem I subunit IX;protein_id=ABE47554.1; chloroplast + View VVCG00680 rpl33;ribosomal protein L33;protein_id=ABE47555.1; chloroplast + View
Zea mays
Gene id
Description
Chromosome
Strand
Multiplicon
ZMCG00080 30S ribosomal protein S2;30S ribosomal protein S2, chloroplastic chloroplast + View ZMCG00090 ATPase IV subunit;ATP synthase subunit a, chloroplastic (F-ATPase subunit IV)(ATP synthase F0 sector subunit a) chloroplast + View ZMCG00180 50S ribosomal protein L33, chloroplastic chloroplast + View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MECG00150 | atpA;ATP synthase CF1 alpha subunit;protein_id=ABV66139.1; | chloroplast | - | View |
| MECG00170 | atpH;ATP synthase CF0 subunit III;protein_id=ABV66141.1; | chloroplast | - | View |
| MECG00180 | atpI;ATP synthase CF0 subunit IV;protein_id=ABV66142.1; | chloroplast | - | View |
| MECG00190 | rps2;ribosomal protein S2;protein_id=ABV66143.1; | chloroplast | - | View |
| MECG00680 | psaJ;photosystem I subunit IX;protein_id=ABV66174.1; | chloroplast | + | View |
| MECG00690 | rpl33;ribosomal protein L33;protein_id=ABV66175.1; | chloroplast | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ATCG00120 | Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.;ATP synthase subunit alpha | chloroplast | - | View |
| ATCG00140 | ATPase III subunit;ATP synthase subunit C family protein | chloroplast | - | View |
| ATCG00150 | Encodes a subunit of ATPase complex CF0, which is a proton channel that supplies the proton motive force to drive ATP synthesis by CF1 portion of the complex.;ATPase, F0 complex, subunit A protein | chloroplast | - | View |
| ATCG00160 | Chloroplast ribosomal protein S2;ribosomal protein S2 | chloroplast | - | View |
| ATCG00630 | Encodes subunit J of photosystem I.;PSAJ | chloroplast | + | View |
| ATCG00640 | encodes a chloroplast ribosomal protein L33, a constituent of the large subunit of the ribosomal complex;ribosomal protein L33 | chloroplast | + | View |
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CPCG00130 | atpA;ATPase alpha subunit;protein_id=ABY86767.1; | chloroplast | - | View |
| CPCG00150 | atpH;ATP synthase CF0 C chain;protein_id=ABY86769.1; | chloroplast | - | View |
| CPCG00160 | atpI;ATP synthase CF0 A chain;protein_id=ABY86770.1; | chloroplast | - | View |
| CPCG00170 | rps2;ribosomal protein S2;protein_id=ABY86771.1; | chloroplast | - | View |
| CPCG00640 | psaJ;photosystem I subunit IX;protein_id=ABY86802.1; | chloroplast | + | View |
| CPCG00650 | rpl33;ribosomal protein L33;protein_id=ABY86803.1; | chloroplast | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GMCG00390 | rps2;ribosomal protein S2;protein_id=ABC25126.1; | chloroplast | + | View |
| GMCG00400 | atpI;ATP synthase CF0 subunit IV;protein_id=ABC25127.1; | chloroplast | + | View |
| GMCG00410 | atpH;ATP synthase CF0 subunit III;protein_id=ABC25128.1; | chloroplast | + | View |
| GMCG00430 | atpA;ATP synthase CF1 alpha subunit;protein_id=ABC25130.1; | chloroplast | + | View |
| GMCG00630 | psaJ;photosystem I subunit IX;protein_id=ABC25144.1; | chloroplast | + | View |
| GMCG00640 | rpl33;ribosomal protein L33;protein_id=ABC25145.1; | chloroplast | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJCG00380 | rps2;ribosomal protein S2;protein_id=BAB33197.1; | chloroplast | + | View |
| LJCG00390 | atpI;ATPase a subunit;protein_id=BAB33198.1; | chloroplast | + | View |
| LJCG00400 | atpH;ATPase III subunit;protein_id=BAB33199.1; | chloroplast | + | View |
| LJCG00420 | atpA;ATPase alpha subunit;protein_id=BAB33201.1; | chloroplast | + | View |
| LJCG00630 | psaJ;PSI J protein;protein_id=BAB33216.1; | chloroplast | + | View |
| LJCG00640 | rpl33;ribosomal protein L33;protein_id=BAB33217.1; | chloroplast | + | View |
Micromonas sp. RCC299
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MRCC299_CG00320 | ATP synthase CF1 alpha chain;protein_id=ACO55544.1; | chloroplast | - | View |
| MRCC299_CG00340 | ATP synthase CF0 subunit C;protein_id=ACO55546.1; | chloroplast | - | View |
| MRCC299_CG00350 | ATP synthase CF0 subunit A;protein_id=ACO55547.1; | chloroplast | - | View |
| MRCC299_CG00600 | small subunit ribosomal protein S2;protein_id=ACO55562.1; | chloroplast | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G051110 | ATP synthase subunit a chloroplastic (AHRD V1 *-*- B8R490_TRISU); contains Interpro domain(s) IPR005706 Ribosomal protein S2, bacterial-type | 4 | - | View |
| MT4G051350 | 30S ribosomal protein S18, chloroplastic (AHRD V1 *-*- P49169); contains Interpro domain(s) IPR001648 Ribosomal protein S18 | 4 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_CG00110 | rps2;ribosomal protein S2;protein_id=AAS46049.1; | chloroplast | + | View |
| OSINDICA_CG00120 | atpI;ATP synthase CF0 A chain;protein_id=AAS46050.1; | chloroplast | + | View |
| OSINDICA_CG00130 | atpH;ATP synthase CF0 C chain;protein_id=AAS46051.1; | chloroplast | + | View |
| OSINDICA_CG00140 | atpA;ATP synthase CF1 alpha chain;protein_id=AAS46052.1; | chloroplast | + | View |
| OSINDICA_CG00300 | rpl33;ribosomal protein L33;protein_id=AAS46068.1; | chloroplast | + | View |
Ostreococcus tauri
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OTCG00400 | Rps2;protein_id=CAL36354.1; | chloroplast | + | View |
| OTCG00640 | AtpI;protein_id=CAL36369.1; | chloroplast | + | View |
| OTCG00650 | AtpH;protein_id=CAL36370.1; | chloroplast | + | View |
| OTCG00670 | AtpA;protein_id=CAL36372.1; | chloroplast | + | View |
Physcomitrella patens
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PPCG00770 | atpA;ATP synthase alpha subunit;protein_id=BAC85066.1; | chloroplast | - | View |
| PPCG00790 | atpH;ATP synthase III subunit;protein_id=BAC85068.1; | chloroplast | - | View |
| PPCG00800 | atpI;ATP synthase IV subunit;protein_id=BAC85069.1; | chloroplast | - | View |
| PPCG00810 | rps2;ribosomal protein S2;protein_id=BAC85070.1; | chloroplast | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PTCG00120 | atpA;ATP synthase CF1 alpha subunit;protein_id=ABO36687.1; | chloroplast | - | View |
| PTCG00140 | atpH;ATP synthase CF0 subunit III;protein_id=ABO36689.1; | chloroplast | - | View |
| PTCG00150 | atpI;ATP synthase CF0 A chain subunit IV;protein_id=ABO36690.1; | chloroplast | - | View |
| PTCG00160 | rps2;30S ribosomal protein S2;protein_id=ABO36691.1; | chloroplast | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29923G00020 | 29923 | + | View | |
| RC29923G00030 | 29923 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC04G003640 | Tc04 | + | View | |
| TC04G003950 | Tc04 | + | View | |
| TCCG00130 | atpA;ATP synthase CF1 alpha subunit;protein_id=ADO64875.1; | chloroplast | - | View |
| TCCG00150 | atpH;ATP synthase CF0 subunit III;protein_id=ADO64877.1; | chloroplast | - | View |
| TCCG00160 | atpI;ATP synthase CF0 subunit IV;protein_id=ADO64878.1; | chloroplast | - | View |
| TCCG00170 | rps2;ribosomal protein S2;protein_id=ADO64879.1; | chloroplast | - | View |
| TCCG00640 | psaJ;photosystem I subunit IX;protein_id=ADO64910.1; | chloroplast | + | View |
| TCCG00650 | rpl33;ribosomal protein L33;protein_id=ADO64911.1; | chloroplast | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VVCG00140 | atpA;ATP synthase CF1 alpha subunit;protein_id=ABE47519.1; | chloroplast | - | View |
| VVCG00160 | atpH;ATP synthase CF0 subunit III;protein_id=ABE47521.1; | chloroplast | - | View |
| VVCG00170 | atpI;ATP synthase CF0 subunit IV;protein_id=ABE47522.1; | chloroplast | - | View |
| VVCG00180 | rps2;ribosomal protein S2;protein_id=ABE47523.1; | chloroplast | - | View |
| VVCG00670 | psaJ;photosystem I subunit IX;protein_id=ABE47554.1; | chloroplast | + | View |
| VVCG00680 | rpl33;ribosomal protein L33;protein_id=ABE47555.1; | chloroplast | + | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZMCG00080 | 30S ribosomal protein S2;30S ribosomal protein S2, chloroplastic | chloroplast | + | View |
| ZMCG00090 | ATPase IV subunit;ATP synthase subunit a, chloroplastic (F-ATPase subunit IV)(ATP synthase F0 sector subunit a) | chloroplast | + | View |
| ZMCG00180 | 50S ribosomal protein L33, chloroplastic | chloroplast | + | View |