Anchorpoints

Gene id
MD07G013490
Organism
Malus domestica

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G17530RAB GTPase homolog 1C (RAB1C); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 1A (TAIR:AT5G47200.1); Has 29496 Blast hits to 29428 proteins in 784 species: Archae - 23; Bacteria - 169; Metazoa - 15486; Fungi - 4134; Plants - 3462; Viruses - 20; Other Eukaryotes - 6202 (source: NCBI BLink).;RAB GTPase homolog 1C4-View
AT1G01200RAB GTPase homolog A3 (RABA3); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, nucleus, cell plate; EXPRESSED IN: lateral root cap, hypocotyl, root, flower, epidermis; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4C (TAIR:AT5G47960.1); Has 27164 Blast hits to 27137 proteins in 734 species: Archae - 19; Bacteria - 134; Metazoa - 14292; Fungi - 3779; Plants - 3194; Viruses - 20; Other Eukaryotes - 5726 (source: NCBI BLink).;RAB GTPase homolog A31-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00096G00680supercontig_96+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV7G04830Ras-related protein Rab11D (similar to)LG7-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM16G0246016Gm16-View
GM03G4203003Gm03+View
GM07G0586007Gm07-View
GM19G4473019Gm19+View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJ1G057040chr1+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03581G00430scaffold03581-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G027220Ras-related protein Rab-11A (AHRD V1 ***- Q5ZJN2); contains Interpro domain(s) IPR015595 Rab11-related8+View
MT7G117910Ras-related GTP-binding protein (Fragment) (AHRD V1 *-** Q0WNE9_ARATH); contains Interpro domain(s) IPR015595 Rab11-related7+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G09580PACid=17338654;name=POPTR_0014s09770;alias=pt036083m,gw1.XIV.1826.1;scaffold_14+View
PT02G17430PACid=17344476;name=POPTR_0002s17620;alias=pt021397m,eugene3.00021627;scaffold_2-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC28014G0001028014+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G034070Tc01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G07110name=GSVIVG01027396001;chr15-View


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Gene id
Species
Description
Chromosome
Strand