Anchorpoints

Gene id
LJ4G029590
Organism
Lotus japonicus

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL3G20420scaffold_3+View
AL8G02380scaffold_8-View
AL7G24270scaffold_7+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18430RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E4-View
AT3G18820RAB GTPase homolog G3F (RAB7B); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3E (TAIR:AT1G49300.2); Has 26432 Blast hits to 26399 proteins in 759 species: Archae - 38; Bacteria - 171; Metazoa - 13566; Fungi - 4011; Plants - 2887; Viruses - 20; Other Eukaryotes - 5739 (source: NCBI BLink).;RAB GTPase homolog G3F3+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00042G01590supercontig_42+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G3252005Gm05+View
GM08G1668008Gm08+View
GM06G1595006Gm06+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD05G0049505-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT8G093740Ras-related protein Rab-18-B (AHRD V1 ***- Q6DHC1); contains Interpro domain(s) IPR015598 Rab188+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G07320PACid=17308357;name=POPTR_0002s07510;alias=pt021501m;scaffold_2+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G011970Tc01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G01640name=GSVIVG01021143001;chr10-View
VV10G01660name=GSVIVG01021145001;chr10-View


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Gene id
Species
Description
Chromosome
Strand