Anchorpoints
- Gene id
- GM05G04540
- Organism
- Glycine max
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
GM11G03460 11 Gm11 - View GM01G41910 01 Gm01 + View GM17G14970 17 Gm17 - View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL5G31360 scaffold_5 + View AL4G33050 scaffold_4 + View AL7G26700 scaffold_7 + View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT4G16520 autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Ubiquitin-like superfamily protein 4 - View AT3G60640 AUTOPHAGY 8G (ATG8G); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G16520.2); Has 1513 Blast hits to 1511 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 719; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink).;Ubiquitin-like superfamily protein 3 + View AT2G45170 Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes.;AUTOPHAGY 8E 2 + View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV7G11950 Autophagy-related protein 8f (Protein autophagy 8f), Precursor (similar to) LG7 - View FV5G00080 Autophagy-related protein 8f (Protein autophagy 8f), Precursor (putative) LG5 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME04450G00140 scaffold04450 - View ME07035G01270 scaffold07035 - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT4G101090 Autophagy-related protein 8f (AHRD V1 ***- Q8VYK7); contains Interpro domain(s) IPR004241 Light chain 3 (LC3) 4 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT01G00280 PACid=17333212;name=POPTR_0001s00470;alias=pt040854m; scaffold_1 - View PT02G14350 PACid=17344661;name=POPTR_0002s14540;alias=pt021928m,eugene3.00021333; scaffold_2 - View PT03G10080 PACid=17323174;name=POPTR_0003s11030;alias=pt024363m; scaffold_3 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC30174G00850 30174 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC03G025180 Tc03 + View TC01G038110 Tc01 - View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV02G00360 name=GSVIVG01001307001; chr2 - View VV15G09070 name=GSVIVG01027638001; chr15 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM11G03460 | 11 | Gm11 | - | View |
| GM01G41910 | 01 | Gm01 | + | View |
| GM17G14970 | 17 | Gm17 | - | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL5G31360 | scaffold_5 | + | View | |
| AL4G33050 | scaffold_4 | + | View | |
| AL7G26700 | scaffold_7 | + | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT4G16520 | autophagy 8f (ATG8F); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G60640.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).;Ubiquitin-like superfamily protein | 4 | - | View |
| AT3G60640 | AUTOPHAGY 8G (ATG8G); CONTAINS InterPro DOMAIN/s: Light chain 3 (LC3) (InterPro:IPR004241); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G16520.2); Has 1513 Blast hits to 1511 proteins in 273 species: Archae - 0; Bacteria - 0; Metazoa - 719; Fungi - 178; Plants - 302; Viruses - 3; Other Eukaryotes - 311 (source: NCBI BLink).;Ubiquitin-like superfamily protein | 3 | + | View |
| AT2G45170 | Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes.;AUTOPHAGY 8E | 2 | + | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV7G11950 | Autophagy-related protein 8f (Protein autophagy 8f), Precursor (similar to) | LG7 | - | View |
| FV5G00080 | Autophagy-related protein 8f (Protein autophagy 8f), Precursor (putative) | LG5 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME04450G00140 | scaffold04450 | - | View | |
| ME07035G01270 | scaffold07035 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT4G101090 | Autophagy-related protein 8f (AHRD V1 ***- Q8VYK7); contains Interpro domain(s) IPR004241 Light chain 3 (LC3) | 4 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT01G00280 | PACid=17333212;name=POPTR_0001s00470;alias=pt040854m; | scaffold_1 | - | View |
| PT02G14350 | PACid=17344661;name=POPTR_0002s14540;alias=pt021928m,eugene3.00021333; | scaffold_2 | - | View |
| PT03G10080 | PACid=17323174;name=POPTR_0003s11030;alias=pt024363m; | scaffold_3 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC30174G00850 | 30174 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC03G025180 | Tc03 | + | View | |
| TC01G038110 | Tc01 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV02G00360 | name=GSVIVG01001307001; | chr2 | - | View |
| VV15G09070 | name=GSVIVG01027638001; | chr15 | - | View |