Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
ATCG00020Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core;photosystem II reaction center protein Achloroplast-View
ATCG00040Encodes a maturase located in the trnK intron in the chloroplast genome.;maturase Kchloroplast-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BDCG00020psbA;PSII 32kDa protein;protein_id=ACF08621.1;chloroplast-View
BDCG00040matK;maturase;protein_id=ACF08622.1;chloroplast-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CPCG00030psbA;photosystem II protein D1;protein_id=ABY86762.1;chloroplast-View
CPCG00050matK;maturase;protein_id=ABY86763.1;chloroplast-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GMCG00030psbA;photosystem II protein D1;protein_id=ABC25105.1;chloroplast-View
GMCG00050matK;maturase K;protein_id=ABC25106.1;chloroplast-View

Lotus japonicus

Gene id Description Chromosome Strand Multiplicon
LJCG00020psbA;PSII 32 KDa protein;protein_id=BAB33176.1;chloroplast-View
LJCG00040matK;maturase for trnK intron;protein_id=BAB33177.1;chloroplast-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
MECG00030psbA;photosystem II protein D1;protein_id=ABV66134.1;chloroplast-View
MECG00050matK;maturase K;protein_id=ABV66135.1;chloroplast-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT4G050770Photosystem Q(B) protein (AHRD V1 ***- B8R466_TRISU); contains Interpro domain(s) IPR000484 Photosynthetic reaction centre, L/M4-View
MT4G050780Maturase K (AHRD V1 ***- Q8MCR0_9FABA); contains Interpro domain(s) IPR002866 Maturase, MatK, N-terminal4+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PTCG00030psbA;photosystem II D1-reaction-center protein;protein_id=ABO36683.1;chloroplast-View
PTCG00050matK;maturase K;protein_id=ABO36684.1;chloroplast-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TCCG00030psbA;photosystem II protein D1;protein_id=ADO64870.1;chloroplast-View
TCCG00050matK;maturase K;protein_id=ADO64871.1;chloroplast-View
TC04G003660Tc04+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VVCG00020psbA;photosystem II protein D1;protein_id=ABE47514.1;chloroplast-View
VVCG00040matK;maturase K;protein_id=ABE47515.1;chloroplast-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZMCG00010Maturase K (Intron maturase)chloroplast-View


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Gene id
Species
Description
Chromosome
Strand