Anchorpoints

Gene id
CP00085G01160
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00084G00890supercontig_84+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL5G28320scaffold_5-View
AL4G29470scaffold_4-View
AL4G29490scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G57800basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42300.1); Has 1234 Blast hits to 1224 proteins in 46 species: Archae - 0; Bacteria - 2; Metazoa - 7; Fungi - 4; Plants - 1221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein3-View
AT2G42280basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G51140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein2-View
AT2G42300basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G57800.2); Has 2090 Blast hits to 2084 proteins in 92 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 16; Plants - 2063; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).;basic helix-loop-helix (bHLH) DNA-binding superfamily protein2+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G33670bHLH transcription factorBd4+View
BD3G39927Bd3+View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV6G44980Transcription factor bHLH130 (bHLH 130) (probable)LG6-View
FV6G45100Transcription factor bHLH48 (bHLH 48) (probable)LG6+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM02G2983002Gm02+View
GM10G1215010Gm10-View
GM10G1221010Gm10+View
GM19G3257019Gm19-View
GM03G2971003Gm03-View
GM03G2975003Gm03+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME03602G00460scaffold03602-View
ME03602G00500scaffold03602+View
ME00823G00380scaffold00823-View
ME04681G00240scaffold04681-View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT7G092510Transcription factor bHLH60 (AHRD V1 ***- Q3EAI1); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH7-View
MT7G092540Transcription factor bHLH130 (AHRD V1 ***- Q66GR3); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G31300helix%2Dloop%2Dhelix DNA%2Dbinding domain containing protein, expressed9+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_09G25150source=BGI China;type=FgeneSH;Chr09+View
OSINDICA_08G38040source=BGI China;type=FgeneSH;Chr08+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G05410PACid=17311798;name=POPTR_0006s05600;alias=pt018075m,estExt_fgenesh4_pg.C_1520010;scaffold_6-View
PT06G05450PACid=17343797;name=POPTR_0006s05640;alias=pt018064m;scaffold_6+View
PT16G04910PACid=17305937;name=POPTR_0016s05100;alias=pt003172m;scaffold_16-View
PT16G04960PACid=17342615;name=POPTR_0016s05150;alias=pt003352m;scaffold_16+View
PT16G04970PACid=17318728;name=POPTR_0016s05160;alias=pt003689m;scaffold_16+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC30169G0173030169-View
RC29216G0013029216-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB07G0278107chr_7-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G07970name=GSVIVG01033350001;chr8+View
VV08G08030name=GSVIVG01033356001;chr8-View
VV13G07470name=GSVIVG01032055001;chr13+View
VV06G06410name=GSVIVG01025313001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G17850helix-loop-helix DNA-binding domain containing protein 7+View
ZM02G327102+View


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Gene id
Species
Description
Chromosome
Strand