Anchorpoints

Gene id
CP00055G00810
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL7G02120scaffold_7+View
AL7G02260scaffold_7+View
AL4G01750scaffold_4+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G22290RAB GTPase homolog H1D (RABH1d); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: mitochondrion; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab6-related (InterPro:IPR015600); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog H1E (TAIR:AT5G10260.1); Has 26960 Blast hits to 26930 proteins in 721 species: Archae - 17; Bacteria - 142; Metazoa - 14130; Fungi - 3768; Plants - 3162; Viruses - 20; Other Eukaryotes - 5721 (source: NCBI BLink).;RAB GTPase homolog H1D2+View
AT5G65270RAB GTPase homolog A4A (RABA4a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A4B (TAIR:AT4G39990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).;RAB GTPase homolog A4A5+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G71780GTPase activity (Blast2GO)Bd1-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV0G22230Ras-related protein Rab11D (similar to)scf0513168-View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM05G3102005Gm05-View
GM05G3120005Gm05-View
GM18G0191018Gm18-View
GM18G0204018Gm18-View
GM08G1423008Gm08-View
GM08G1439008Gm08-View
GM11G3801011Gm11-View
GM11G3811011Gm11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD10G00381010-View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME02559G00030scaffold02559+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT3G086980GTP-binding protein (AHRD V1 **** Q08147_PEA); contains Interpro domain(s) IPR015595 Rab11-related3-View
MT3G087160Ras-related protein RABH1B (AHRD V1 ***- O80501); contains Interpro domain(s) IPR003579 Ras small GTPase, Rab type3-View
MT3G087170Ras-related protein Rab-6A (AHRD V1 **-- B6STE7_MAIZE); contains Interpro domain(s) IPR015600 Rab6-related3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07220PACid=17312106;name=POPTR_0005s07410;alias=pt033796m,grail3.0026011301,Pt-ATGB3.3;scaffold_5-View
PT05G07490PACid=17324770;name=POPTR_0005s07680;alias=pt033857m,fgenesh4_pm.C_LG_V000066;scaffold_5-View
PT07G04930PACid=17305840;name=POPTR_0007s05120;alias=pt025804m,Pt-ATGB3.4,estExt_fgenesh4_pm.C_LG_VII0180;scaffold_7-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29772G0010029772-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G0445501chr_1+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC01G008550Tc01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G02610name=GSVIVG01003415001;chr7+View


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Gene id
Species
Description
Chromosome
Strand