Anchorpoints
- Gene id
- CP00007G00140
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL7G24270 scaffold_7 + View AL1G29780 scaffold_1 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G28550 RAB GTPase homolog A1I (RABA1i); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1H (TAIR:AT2G33870.1); Has 26472 Blast hits to 26426 proteins in 734 species: Archae - 24; Bacteria - 151; Metazoa - 13774; Fungi - 3933; Plants - 2930; Viruses - 20; Other Eukaryotes - 5640 (source: NCBI BLink).;RAB GTPase homolog A1I 1 - View AT4G18430 RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E 4 - View AT2G33870 RAB GTPase homolog A1H (ArRABA1h); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1I (TAIR:AT1G28550.1); Has 27076 Blast hits to 27025 proteins in 750 species: Archae - 25; Bacteria - 157; Metazoa - 14072; Fungi - 4066; Plants - 2934; Viruses - 20; Other Eukaryotes - 5802 (source: NCBI BLink).;RAB GTPase homolog A1H 2 - View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV3G13420 Ras-related protein Rab11B (similar to) LG3 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM07G32420 07 Gm07 - View GM07G32440 07 Gm07 - View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD05G004950 5 - View MD10G022990 10 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME11784G00170 scaffold11784 - View ME11784G00190 scaffold11784 - View ME04851G00670 scaffold04851 - View ME04851G00690 scaffold04851 - View
Medicago truncatula
Gene id
Description
Chromosome
Strand
Multiplicon
MT2G014990 GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related 2 - View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT04G04880 PACid=17335475;name=POPTR_0004s05070;alias=pt007922m; scaffold_4 - View PT11G05780 PACid=17338032;name=POPTR_0011s05970;alias=pt014554m,Pt-RAB11.12,estExt_fgenesh4_pg.C_1870018; scaffold_11 - View PT11G05800 PACid=17313201;name=POPTR_0011s05990;alias=pt014612m,Pt-ARAC2.1,estExt_fgenesh4_pg.C_1870020; scaffold_11 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29900G00160 29900 - View RC29900G00180 29900 - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC06G015030 Tc06 + View TC06G015050 Tc06 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV10G01640 name=GSVIVG01021143001; chr10 - View VV10G01660 name=GSVIVG01021145001; chr10 - View
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL7G24270 | scaffold_7 | + | View | |
| AL1G29780 | scaffold_1 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G28550 | RAB GTPase homolog A1I (RABA1i); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, flower, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1H (TAIR:AT2G33870.1); Has 26472 Blast hits to 26426 proteins in 734 species: Archae - 24; Bacteria - 151; Metazoa - 13774; Fungi - 3933; Plants - 2930; Viruses - 20; Other Eukaryotes - 5640 (source: NCBI BLink).;RAB GTPase homolog A1I | 1 | - | View |
| AT4G18430 | RAB GTPase homolog A1E (RABA1e); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1F (TAIR:AT5G60860.1); Has 27831 Blast hits to 27775 proteins in 750 species: Archae - 32; Bacteria - 149; Metazoa - 14651; Fungi - 4104; Plants - 3007; Viruses - 20; Other Eukaryotes - 5868 (source: NCBI BLink).;RAB GTPase homolog A1E | 4 | - | View |
| AT2G33870 | RAB GTPase homolog A1H (ArRABA1h); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A1I (TAIR:AT1G28550.1); Has 27076 Blast hits to 27025 proteins in 750 species: Archae - 25; Bacteria - 157; Metazoa - 14072; Fungi - 4066; Plants - 2934; Viruses - 20; Other Eukaryotes - 5802 (source: NCBI BLink).;RAB GTPase homolog A1H | 2 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV3G13420 | Ras-related protein Rab11B (similar to) | LG3 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM07G32420 | 07 | Gm07 | - | View |
| GM07G32440 | 07 | Gm07 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD05G004950 | 5 | - | View | |
| MD10G022990 | 10 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME11784G00170 | scaffold11784 | - | View | |
| ME11784G00190 | scaffold11784 | - | View | |
| ME04851G00670 | scaffold04851 | - | View | |
| ME04851G00690 | scaffold04851 | - | View |
Medicago truncatula
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MT2G014990 | GTP-binding protein ras-like (AHRD V1 **-* Q9FJH0_ARATH); contains Interpro domain(s) IPR015595 Rab11-related | 2 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT04G04880 | PACid=17335475;name=POPTR_0004s05070;alias=pt007922m; | scaffold_4 | - | View |
| PT11G05780 | PACid=17338032;name=POPTR_0011s05970;alias=pt014554m,Pt-RAB11.12,estExt_fgenesh4_pg.C_1870018; | scaffold_11 | - | View |
| PT11G05800 | PACid=17313201;name=POPTR_0011s05990;alias=pt014612m,Pt-ARAC2.1,estExt_fgenesh4_pg.C_1870020; | scaffold_11 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29900G00160 | 29900 | - | View | |
| RC29900G00180 | 29900 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC06G015030 | Tc06 | + | View | |
| TC06G015050 | Tc06 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV10G01640 | name=GSVIVG01021143001; | chr10 | - | View |
| VV10G01660 | name=GSVIVG01021145001; | chr10 | - | View |