Anchorpoints

Gene id
CP00005G02730
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00002G00720supercontig_2+View


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL2G06560scaffold_2-View
AL8G29160scaffold_8-View
AL8G29200scaffold_8+View
AL1G19840scaffold_1+View
AL0G02160scaffold_22-View
AL0G02170scaffold_22-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G59740Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT5G62680Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein5-View
AT5G62730Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 6918 Blast hits to 6790 proteins in 1275 species: Archae - 0; Bacteria - 3368; Metazoa - 483; Fungi - 402; Plants - 2165; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).;Major facilitator superfamily protein5+View
AT1G18880Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 4002 Blast hits to 3797 proteins in 617 species: Archae - 0; Bacteria - 698; Metazoa - 561; Fungi - 400; Plants - 2175; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G69850Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.;nitrate transporter 1:21-View
AT1G69860Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Major facilitator superfamily protein1+View
AT1G69870Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.;nitrate transporter 1.71+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G12190Bd1+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G1637018Gm18-View
GM18G1644018Gm18+View
GM18G1649018Gm18+View
GM02G0262002Gm02-View
GM02G0267002Gm02+View
GM02G0268002Gm02+View
GM08G4073008Gm08+View
GM08G4074008Gm08+View
GM05G0138005Gm05-View
GM05G0143005Gm05+View
GM05G0144005Gm05+View
GM05G0145005Gm05+View
GM01G0483001Gm01-View
GM01G0485001Gm01-View
GM01G0490001Gm01+View
GM17G1043017Gm17-View
GM17G1044017Gm17-View
GM17G1045017Gm17-View
GM17G1046017Gm17-View
GM17G1050017Gm17+View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD06G0152506-View
MD06G0152806-View
MD13G00531013-View
MD16G00428016-View
MD16G00435016+View
MD16G00436016+View

Manihot esculenta

Gene id Description Chromosome Strand Multiplicon
ME04209G00090scaffold04209-View
ME04209G00140scaffold04209+View
ME11495G00680scaffold11495-View
ME11495G00700scaffold11495-View
ME11495G00770scaffold11495+View
ME12794G01800scaffold12794+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G06680PACid=17326875;name=POPTR_0012s07250;alias=pt015659m;scaffold_12-View
PT12G06750PACid=17319608;name=POPTR_0012s07320;alias=pt015657m,eugene3.00120653;scaffold_12+View
PT12G06770PACid=17341649;name=POPTR_0012s07340;alias=pt015634m,gw1.XII.1795.1;scaffold_12+View
PT10G03180PACid=17325120;name=POPTR_0010s04320;alias=pt011905m;scaffold_10-View
PT10G03230PACid=17335772;name=POPTR_0010s04370;alias=pt011450m,fgenesh4_pg.C_LG_VIII001934;scaffold_10+View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29736G0038029736-View
RC29736G0050029736+View
RC30147G0732030147-View
RC30147G0733030147-View
RC30147G0742030147+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G0117001chr_1+View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC02G034120Tc02-View
TC02G034200Tc02+View
TC02G034220Tc02+View
TC02G021700Tc02+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G12740name=GSVIVG01020076001;chr1+View
VV01G12800name=GSVIVG01020084001;chr1-View
VV14G12290name=GSVIVG01032550001;chr14-View
VV17G04220name=GSVIVG01008064001;chr17+View
VV17G04290name=GSVIVG01008071001;chr17-View
VV17G04300name=GSVIVG01008072001;chr17-View
VV17G04310name=GSVIVG01008073001;chr17-View


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Gene id
Species
Description
Chromosome
Strand