Anchorpoints
- Gene id
- CP00005G02700
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
CP00002G00720 supercontig_2 + View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL2G06560 scaffold_2 - View AL8G29160 scaffold_8 - View AL8G29200 scaffold_8 + View AL1G19840 scaffold_1 + View AL0G02160 scaffold_22 - View AL0G02170 scaffold_22 - View
Arabidopsis thaliana
Gene id
Description
Chromosome
Strand
Multiplicon
AT1G59740 Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).;Major facilitator superfamily protein 1 + View AT5G62680 Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein 5 - View AT5G62730 Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 6918 Blast hits to 6790 proteins in 1275 species: Archae - 0; Bacteria - 3368; Metazoa - 483; Fungi - 402; Plants - 2165; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).;Major facilitator superfamily protein 5 + View AT1G18880 Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 4002 Blast hits to 3797 proteins in 617 species: Archae - 0; Bacteria - 698; Metazoa - 561; Fungi - 400; Plants - 2175; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).;Major facilitator superfamily protein 1 + View AT1G69850 Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.;nitrate transporter 1:2 1 - View AT1G69860 Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Major facilitator superfamily protein 1 + View AT1G69870 Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.;nitrate transporter 1.7 1 + View
Brachypodium distachyon
Gene id
Description
Chromosome
Strand
Multiplicon
BD1G12190 Bd1 + View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM18G16370 18 Gm18 - View GM18G16440 18 Gm18 + View GM18G16490 18 Gm18 + View GM02G02620 02 Gm02 - View GM02G02670 02 Gm02 + View GM02G02680 02 Gm02 + View GM08G40730 08 Gm08 + View GM08G40740 08 Gm08 + View GM05G01380 05 Gm05 - View GM05G01430 05 Gm05 + View GM05G01440 05 Gm05 + View GM05G01450 05 Gm05 + View GM01G04830 01 Gm01 - View GM01G04850 01 Gm01 - View GM01G04900 01 Gm01 + View GM17G10430 17 Gm17 - View GM17G10440 17 Gm17 - View GM17G10450 17 Gm17 - View GM17G10460 17 Gm17 - View GM17G10500 17 Gm17 + View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD06G015250 6 - View MD06G015280 6 - View MD13G005310 13 - View MD16G004280 16 - View MD16G004350 16 + View MD16G004360 16 + View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME04209G00090 scaffold04209 - View ME04209G00140 scaffold04209 + View ME11495G00680 scaffold11495 - View ME11495G00700 scaffold11495 - View ME11495G00770 scaffold11495 + View ME12794G01800 scaffold12794 + View
Populus trichocarpa
Gene id
Description
Chromosome
Strand
Multiplicon
PT12G06680 PACid=17326875;name=POPTR_0012s07250;alias=pt015659m; scaffold_12 - View PT12G06750 PACid=17319608;name=POPTR_0012s07320;alias=pt015657m,eugene3.00120653; scaffold_12 + View PT12G06770 PACid=17341649;name=POPTR_0012s07340;alias=pt015634m,gw1.XII.1795.1; scaffold_12 + View PT10G03180 PACid=17325120;name=POPTR_0010s04320;alias=pt011905m; scaffold_10 - View PT10G03230 PACid=17335772;name=POPTR_0010s04370;alias=pt011450m,fgenesh4_pg.C_LG_VIII001934; scaffold_10 + View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29736G00380 29736 - View RC29736G00500 29736 + View RC30147G07320 30147 - View RC30147G07330 30147 - View RC30147G07420 30147 + View
Sorghum bicolor
Gene id
Description
Chromosome
Strand
Multiplicon
SB01G011700 1 chr_1 + View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC02G034120 Tc02 - View TC02G034200 Tc02 + View TC02G034220 Tc02 + View TC02G021700 Tc02 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV01G12740 name=GSVIVG01020076001; chr1 + View VV01G12800 name=GSVIVG01020084001; chr1 - View VV14G12290 name=GSVIVG01032550001; chr14 - View VV17G04220 name=GSVIVG01008064001; chr17 + View VV17G04290 name=GSVIVG01008071001; chr17 - View VV17G04300 name=GSVIVG01008072001; chr17 - View VV17G04310 name=GSVIVG01008073001; chr17 - View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00002G00720 | supercontig_2 | + | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL2G06560 | scaffold_2 | - | View | |
| AL8G29160 | scaffold_8 | - | View | |
| AL8G29200 | scaffold_8 | + | View | |
| AL1G19840 | scaffold_1 | + | View | |
| AL0G02160 | scaffold_22 | - | View | |
| AL0G02170 | scaffold_22 | - | View |
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT1G59740 | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G33440.1); Has 6789 Blast hits to 6649 proteins in 1324 species: Archae - 0; Bacteria - 3372; Metazoa - 487; Fungi - 362; Plants - 2181; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).;Major facilitator superfamily protein | 1 | + | View |
| AT5G62680 | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport, response to karrikin; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT3G47960.1); Has 3769 Blast hits to 3614 proteins in 562 species: Archae - 0; Bacteria - 609; Metazoa - 518; Fungi - 366; Plants - 2162; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).;Major facilitator superfamily protein | 5 | - | View |
| AT5G62730 | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1:2 (TAIR:AT1G69850.1); Has 6918 Blast hits to 6790 proteins in 1275 species: Archae - 0; Bacteria - 3368; Metazoa - 483; Fungi - 402; Plants - 2165; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).;Major facilitator superfamily protein | 5 | + | View |
| AT1G18880 | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G62680.1); Has 4002 Blast hits to 3797 proteins in 617 species: Archae - 0; Bacteria - 698; Metazoa - 561; Fungi - 400; Plants - 2175; Viruses - 0; Other Eukaryotes - 168 (source: NCBI BLink).;Major facilitator superfamily protein | 1 | + | View |
| AT1G69850 | Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots.;nitrate transporter 1:2 | 1 | - | View |
| AT1G69860 | Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 1.7 (TAIR:AT1G69870.1); Has 5388 Blast hits to 5286 proteins in 980 species: Archae - 0; Bacteria - 2151; Metazoa - 479; Fungi - 383; Plants - 2163; Viruses - 0; Other Eukaryotes - 212 (source: NCBI BLink).;Major facilitator superfamily protein | 1 | + | View |
| AT1G69870 | Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.;nitrate transporter 1.7 | 1 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G12190 | Bd1 | + | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM18G16370 | 18 | Gm18 | - | View |
| GM18G16440 | 18 | Gm18 | + | View |
| GM18G16490 | 18 | Gm18 | + | View |
| GM02G02620 | 02 | Gm02 | - | View |
| GM02G02670 | 02 | Gm02 | + | View |
| GM02G02680 | 02 | Gm02 | + | View |
| GM08G40730 | 08 | Gm08 | + | View |
| GM08G40740 | 08 | Gm08 | + | View |
| GM05G01380 | 05 | Gm05 | - | View |
| GM05G01430 | 05 | Gm05 | + | View |
| GM05G01440 | 05 | Gm05 | + | View |
| GM05G01450 | 05 | Gm05 | + | View |
| GM01G04830 | 01 | Gm01 | - | View |
| GM01G04850 | 01 | Gm01 | - | View |
| GM01G04900 | 01 | Gm01 | + | View |
| GM17G10430 | 17 | Gm17 | - | View |
| GM17G10440 | 17 | Gm17 | - | View |
| GM17G10450 | 17 | Gm17 | - | View |
| GM17G10460 | 17 | Gm17 | - | View |
| GM17G10500 | 17 | Gm17 | + | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD06G015250 | 6 | - | View | |
| MD06G015280 | 6 | - | View | |
| MD13G005310 | 13 | - | View | |
| MD16G004280 | 16 | - | View | |
| MD16G004350 | 16 | + | View | |
| MD16G004360 | 16 | + | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME04209G00090 | scaffold04209 | - | View | |
| ME04209G00140 | scaffold04209 | + | View | |
| ME11495G00680 | scaffold11495 | - | View | |
| ME11495G00700 | scaffold11495 | - | View | |
| ME11495G00770 | scaffold11495 | + | View | |
| ME12794G01800 | scaffold12794 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT12G06680 | PACid=17326875;name=POPTR_0012s07250;alias=pt015659m; | scaffold_12 | - | View |
| PT12G06750 | PACid=17319608;name=POPTR_0012s07320;alias=pt015657m,eugene3.00120653; | scaffold_12 | + | View |
| PT12G06770 | PACid=17341649;name=POPTR_0012s07340;alias=pt015634m,gw1.XII.1795.1; | scaffold_12 | + | View |
| PT10G03180 | PACid=17325120;name=POPTR_0010s04320;alias=pt011905m; | scaffold_10 | - | View |
| PT10G03230 | PACid=17335772;name=POPTR_0010s04370;alias=pt011450m,fgenesh4_pg.C_LG_VIII001934; | scaffold_10 | + | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29736G00380 | 29736 | - | View | |
| RC29736G00500 | 29736 | + | View | |
| RC30147G07320 | 30147 | - | View | |
| RC30147G07330 | 30147 | - | View | |
| RC30147G07420 | 30147 | + | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G011700 | 1 | chr_1 | + | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC02G034120 | Tc02 | - | View | |
| TC02G034200 | Tc02 | + | View | |
| TC02G034220 | Tc02 | + | View | |
| TC02G021700 | Tc02 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G12740 | name=GSVIVG01020076001; | chr1 | + | View |
| VV01G12800 | name=GSVIVG01020084001; | chr1 | - | View |
| VV14G12290 | name=GSVIVG01032550001; | chr14 | - | View |
| VV17G04220 | name=GSVIVG01008064001; | chr17 | + | View |
| VV17G04290 | name=GSVIVG01008071001; | chr17 | - | View |
| VV17G04300 | name=GSVIVG01008072001; | chr17 | - | View |
| VV17G04310 | name=GSVIVG01008073001; | chr17 | - | View |