Anchorpoints

Gene id
CP00002G02790
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis lyrata

Gene id Description Chromosome Strand Multiplicon
AL4G15100scaffold_4-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G30470HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif. It functions as an active repressor of the Spo minimal promoter (derived from a gene for sweet potato sporamin A1) through the EAR motif. It contains a plant-specific B3 DNA-binding domain. The Arabidopsis genome contains 42 genes with B3 domains which could be classified into three families that are represented by ABI3, ARF1 and RAV1. HSI2 belongs to the ABI3 family. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50┬ÁM ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain.;high-level expression of sugar-inducible gene 22-View

Fragaria vesca

Gene id Description Chromosome Strand Multiplicon
FV3G31260B3 domain-containing protein Os07g0679700 (probable)LG3+View

Glycine max

Gene id Description Chromosome Strand Multiplicon
GM18G0584018Gm18+View
GM14G3849014Gm14-View
GM11G3127011Gm11-View

Malus domestica

Gene id Description Chromosome Strand Multiplicon
MD03G0038803+View
MD11G00399011+View
MD11G00407011+View

Medicago truncatula

Gene id Description Chromosome Strand Multiplicon
MT5G075410B3 domain-containing transcription repressor VAL2 (AHRD V1 **** Q5CCK4); contains Interpro domain(s) IPR003340 Transcriptional factor B35-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G48200B3 DNA binding domain containing protein, putative, expressed7-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_07G40130source=BGI China;type=FgeneSH;Chr07-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G14760PACid=17314707;name=POPTR_0013s15330;alias=pt030351m;scaffold_13-View
PT19G13930PACid=17324636;name=POPTR_0019s15070;alias=pt009676m;scaffold_19-View

Ricinus communis

Gene id Description Chromosome Strand Multiplicon
RC29976G0012029976-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G0430002chr_2-View

Theobroma cacao

Gene id Description Chromosome Strand Multiplicon
TC04G016290Tc04+View
TC09G035210Tc09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G00380name=GSVIVG01024559001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G30140hypothetical protein LOC100382023 7-View


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Gene id
Species
Description
Chromosome
Strand