Anchorpoints
- Gene id
- AT4G26110
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
AT5G56940 Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink).;Ribosomal protein S16 family protein 5 + View AT5G56950 Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.;nucleosome assembly protein 1;3 5 + View
Orthologs (inter-species colinear regions)
Arabidopsis lyrata
Gene id
Description
Chromosome
Strand
Multiplicon
AL8G22560 scaffold_8 + View AL8G22570 scaffold_8 + View AL7G15950 scaffold_7 - View AL3G36710 scaffold_3 - View
Fragaria vesca
Gene id
Description
Chromosome
Strand
Multiplicon
FV1G09200 DNA repair protein recA homolog 3, mitochondrial, Precursor (putative) LG1 - View FV1G09210 Nucleosome assembly protein 1-like 1 (probable) LG1 - View FV1G09220 30S ribosomal protein S16 (probable) LG1 - View
Glycine max
Gene id
Description
Chromosome
Strand
Multiplicon
GM15G18590 15 Gm15 - View GM15G18600 15 Gm15 - View GM15G18610 15 Gm15 + View GM13G16490 13 Gm13 - View GM13G16500 13 Gm13 - View GM09G07400 09 Gm09 - View GM09G07410 09 Gm09 - View GM09G07420 09 Gm09 + View
Lotus japonicus
Gene id
Description
Chromosome
Strand
Multiplicon
LJ4G024300 chr4 - View LJ4G024310 chr4 - View
Malus domestica
Gene id
Description
Chromosome
Strand
Multiplicon
MD15G014950 15 - View
Manihot esculenta
Gene id
Description
Chromosome
Strand
Multiplicon
ME10493G00930 scaffold10493 + View ME10493G00940 scaffold10493 + View ME05875G00700 scaffold05875 - View
Ricinus communis
Gene id
Description
Chromosome
Strand
Multiplicon
RC29912G00640 29912 - View RC29912G00650 29912 - View
Theobroma cacao
Gene id
Description
Chromosome
Strand
Multiplicon
TC09G007700 Tc09 + View TC09G007710 Tc09 + View TC09G007720 Tc09 + View
Vitis vinifera
Gene id
Description
Chromosome
Strand
Multiplicon
VV11G03440 name=GSVIVG01015186001; chr11 + View VV11G03450 name=GSVIVG01015187001; chr11 + View VV11G03460 name=GSVIVG01015188001; chr11 + View
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G56940 | Ribosomal protein S16 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: mitochondrion, ribosome, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S16 (InterPro:IPR000307); BEST Arabidopsis thaliana protein match is: small subunit ribosomal protein 16 (TAIR:AT4G34620.1); Has 8528 Blast hits to 8528 proteins in 2923 species: Archae - 0; Bacteria - 5438; Metazoa - 128; Fungi - 129; Plants - 517; Viruses - 0; Other Eukaryotes - 2316 (source: NCBI BLink).;Ribosomal protein S16 family protein | 5 | + | View |
| AT5G56950 | Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.;nucleosome assembly protein 1;3 | 5 | + | View |
Arabidopsis lyrata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AL8G22560 | scaffold_8 | + | View | |
| AL8G22570 | scaffold_8 | + | View | |
| AL7G15950 | scaffold_7 | - | View | |
| AL3G36710 | scaffold_3 | - | View |
Fragaria vesca
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| FV1G09200 | DNA repair protein recA homolog 3, mitochondrial, Precursor (putative) | LG1 | - | View |
| FV1G09210 | Nucleosome assembly protein 1-like 1 (probable) | LG1 | - | View |
| FV1G09220 | 30S ribosomal protein S16 (probable) | LG1 | - | View |
Glycine max
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| GM15G18590 | 15 | Gm15 | - | View |
| GM15G18600 | 15 | Gm15 | - | View |
| GM15G18610 | 15 | Gm15 | + | View |
| GM13G16490 | 13 | Gm13 | - | View |
| GM13G16500 | 13 | Gm13 | - | View |
| GM09G07400 | 09 | Gm09 | - | View |
| GM09G07410 | 09 | Gm09 | - | View |
| GM09G07420 | 09 | Gm09 | + | View |
Lotus japonicus
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| LJ4G024300 | chr4 | - | View | |
| LJ4G024310 | chr4 | - | View |
Malus domestica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MD15G014950 | 15 | - | View |
Manihot esculenta
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ME10493G00930 | scaffold10493 | + | View | |
| ME10493G00940 | scaffold10493 | + | View | |
| ME05875G00700 | scaffold05875 | - | View |
Ricinus communis
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| RC29912G00640 | 29912 | - | View | |
| RC29912G00650 | 29912 | - | View |
Theobroma cacao
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| TC09G007700 | Tc09 | + | View | |
| TC09G007710 | Tc09 | + | View | |
| TC09G007720 | Tc09 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV11G03440 | name=GSVIVG01015186001; | chr11 | + | View |
| VV11G03450 | name=GSVIVG01015187001; | chr11 | + | View |
| VV11G03460 | name=GSVIVG01015188001; | chr11 | + | View |